Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0211 |
Symbol | |
ID | 4239726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 213631 |
End bp | 214347 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638103747 |
Product | amino acid ABC transporter, permease |
Protein accession | YP_718418 |
Protein GI | 113460357 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTAAATA ATTTCCTTGC CTCATTGCCT TTTATGACTG AGGCAAGAGC AGAATTAGTC ATCAATGGAT TTTTTCCCAT GGTCAAAGCG GCGGTATTAG TTTCAATACC GCTTGCTATC GTATCATTTA TATTGGGAAT GGTTATTGCG ATTGCTGTTG CGTTAATTCG AGTGAGTCCG AGCCATAGCA TTATCCATCG CCTCTTTTTA TTTATAACAA AAATTTATAT TTCAATTATT CGTGGGACAC CAATGCTAGT GCAAATATCC ATCGTTTTTT ATGGATTACC TGCACTGGGG ATTTTTATTG ATCCTATTCC TGCCGCAATT ATCGGTTTCT CATTAAATGT CGGTGCTTAT GCTTCTGAAA CGGTACGAGC GGCGATACAA TCCGTCCCCA AAGGACAATG GGAAGCTGGT TACACAATCG GCATGACTTA TATGCAAACT TTCCGCCGAA TTATTGTACC GCAAGCATTT CGTGTTGCCG TTCCGCCTCT GAGTAATACA TTTATCAGTT TATTCAAAGA CACTTCATTA GCTTCGGTAG TAACAGTAAC GGAAATGTTC CGAGTGGCAC AACAAGTAGC AAATATGTCT TACGATTTCC TACCCGTTTA TATTGAGGCA GCCCTGATTT ATTGGTGTTT CTGTTTTATC TTGTTCTTAT GGCAAGCTCG CATAGAAAAA AAACTTGCTC GTTATGTTAC TCGCTAA
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Protein sequence | MLNNFLASLP FMTEARAELV INGFFPMVKA AVLVSIPLAI VSFILGMVIA IAVALIRVSP SHSIIHRLFL FITKIYISII RGTPMLVQIS IVFYGLPALG IFIDPIPAAI IGFSLNVGAY ASETVRAAIQ SVPKGQWEAG YTIGMTYMQT FRRIIVPQAF RVAVPPLSNT FISLFKDTSL ASVVTVTEMF RVAQQVANMS YDFLPVYIEA ALIYWCFCFI LFLWQARIEK KLARYVTR
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