Gene HS_0211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0211 
Symbol 
ID4239726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp213631 
End bp214347 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content40% 
IMG OID638103747 
Productamino acid ABC transporter, permease 
Protein accessionYP_718418 
Protein GI113460357 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAAATA ATTTCCTTGC CTCATTGCCT TTTATGACTG AGGCAAGAGC AGAATTAGTC 
ATCAATGGAT TTTTTCCCAT GGTCAAAGCG GCGGTATTAG TTTCAATACC GCTTGCTATC
GTATCATTTA TATTGGGAAT GGTTATTGCG ATTGCTGTTG CGTTAATTCG AGTGAGTCCG
AGCCATAGCA TTATCCATCG CCTCTTTTTA TTTATAACAA AAATTTATAT TTCAATTATT
CGTGGGACAC CAATGCTAGT GCAAATATCC ATCGTTTTTT ATGGATTACC TGCACTGGGG
ATTTTTATTG ATCCTATTCC TGCCGCAATT ATCGGTTTCT CATTAAATGT CGGTGCTTAT
GCTTCTGAAA CGGTACGAGC GGCGATACAA TCCGTCCCCA AAGGACAATG GGAAGCTGGT
TACACAATCG GCATGACTTA TATGCAAACT TTCCGCCGAA TTATTGTACC GCAAGCATTT
CGTGTTGCCG TTCCGCCTCT GAGTAATACA TTTATCAGTT TATTCAAAGA CACTTCATTA
GCTTCGGTAG TAACAGTAAC GGAAATGTTC CGAGTGGCAC AACAAGTAGC AAATATGTCT
TACGATTTCC TACCCGTTTA TATTGAGGCA GCCCTGATTT ATTGGTGTTT CTGTTTTATC
TTGTTCTTAT GGCAAGCTCG CATAGAAAAA AAACTTGCTC GTTATGTTAC TCGCTAA
 
Protein sequence
MLNNFLASLP FMTEARAELV INGFFPMVKA AVLVSIPLAI VSFILGMVIA IAVALIRVSP 
SHSIIHRLFL FITKIYISII RGTPMLVQIS IVFYGLPALG IFIDPIPAAI IGFSLNVGAY
ASETVRAAIQ SVPKGQWEAG YTIGMTYMQT FRRIIVPQAF RVAVPPLSNT FISLFKDTSL
ASVVTVTEMF RVAQQVANMS YDFLPVYIEA ALIYWCFCFI LFLWQARIEK KLARYVTR