Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0197 |
Symbol | gltS |
ID | 4239712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 178666 |
End bp | 179874 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638103733 |
Product | sodium/glutamate symporter (glutamate permease) |
Protein accession | YP_718404 |
Protein GI | 113460343 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0786] Na+/glutamate symporter |
TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000567531 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTTG GTACTTATGA AACAGTGGCA TTAGCCTGCT TGGTTTTATT ACTGGGCTAT TTTTTAGTGA AACGTGTACA TTTCTTGAGC GAATACAATA TTCCGGAGCC GGTGGTTGGT GGCTTTATTG TGGCTATTAT CTTAAGCATT GTGCATCACT TTTGGGATAT GAGTTTTAGT TTTGATACTA AATTACAGAC TACAATGATG TTAGTGTTCT TTAGCTCAAT TGGTCTAAGT GCCAACTTTG CTCGTCTAGC GAAAGGCGGT AAACCTCTCG TTATCTTTTT ATTCGCCGCA CTTGGTTTAA TTATTCTACA AAATACAGTC GGTATCGGAA CCTCTATGCT TGTTGGTTTA GATCCTGCTT ACGGGTTAAT CGCAGGCTCC GTTACATTAA CGGGTGGTCA TGGTACAGGA GCTGCTTGGG CAGAAACTTT AAGTAATCGT TTTGGCATTC AAGGGGCGTT GGAACTGGCA ATGGCTTGTG CGACATTCGG TTTGGTTTTC GGGGGAATTA TCGGTGGACC GGTAGCTAGA TTCTTATTGA AACGCTTGCA TAAAGCGGAA GTACCGGAAG ATGAAAATGT GGACGATATA GAAGAGGTAT TTGAAAAGCC CGTATATCGC CGCAAAATCA ATACTCGTTC AATTATTGAA ACCATTACGA TGATGTCCGT GTGTCTGATT GTCGGGCAAT ATTTAGATGT GCTTACAAAA GGAACCGCAC TTCAATTACC GACGTTTGTT TGGTGTTTAT TTACCGGTAC GGTAATTCGT AATGCACTCG CTCATGTTGT GAAGTTCAAA GTAGCGGATG AGGCAATTGA TGTGTTAGGT ACAGTGGGTT TATCACTATT TTTAGCTATC GCATTGATGT CTTTAAAACT TTGGGAATTG GCTGGATTAG CATTACCAAT TTTAGTCGTA TTGTTAGCAC AGGTTGTGGT AATGGCTACC TATTCTATTT TTGTGACTTA TCGCATGATG GGACGTGATT ATGATGCCGT TGTATTAAGT GCGGGGCATT GTGGTTTCGG CTTGGGGGCG ACACCAACAG CCGTTGCGAA TATGCAAGCA GTTACTTCTC ATTTCGGACC GTCTCACAAA GCGTTTTTAA TTGTGCCTAT GGTTGGTGCA TTCTTTATCG ATCTGTTAAA TAGCGTAGCA TTAAACATCT TTTTAAATAT TGTTGATGTT TTACATTAA
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Protein sequence | MTFGTYETVA LACLVLLLGY FLVKRVHFLS EYNIPEPVVG GFIVAIILSI VHHFWDMSFS FDTKLQTTMM LVFFSSIGLS ANFARLAKGG KPLVIFLFAA LGLIILQNTV GIGTSMLVGL DPAYGLIAGS VTLTGGHGTG AAWAETLSNR FGIQGALELA MACATFGLVF GGIIGGPVAR FLLKRLHKAE VPEDENVDDI EEVFEKPVYR RKINTRSIIE TITMMSVCLI VGQYLDVLTK GTALQLPTFV WCLFTGTVIR NALAHVVKFK VADEAIDVLG TVGLSLFLAI ALMSLKLWEL AGLALPILVV LLAQVVVMAT YSIFVTYRMM GRDYDAVVLS AGHCGFGLGA TPTAVANMQA VTSHFGPSHK AFLIVPMVGA FFIDLLNSVA LNIFLNIVDV LH
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