Gene HS_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0197 
SymbolgltS 
ID4239712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp178666 
End bp179874 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content41% 
IMG OID638103733 
Productsodium/glutamate symporter (glutamate permease) 
Protein accessionYP_718404 
Protein GI113460343 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0786] Na+/glutamate symporter 
TIGRFAM ID[TIGR00210] sodium--glutamate symport carrier (gltS) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000567531 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTTG GTACTTATGA AACAGTGGCA TTAGCCTGCT TGGTTTTATT ACTGGGCTAT 
TTTTTAGTGA AACGTGTACA TTTCTTGAGC GAATACAATA TTCCGGAGCC GGTGGTTGGT
GGCTTTATTG TGGCTATTAT CTTAAGCATT GTGCATCACT TTTGGGATAT GAGTTTTAGT
TTTGATACTA AATTACAGAC TACAATGATG TTAGTGTTCT TTAGCTCAAT TGGTCTAAGT
GCCAACTTTG CTCGTCTAGC GAAAGGCGGT AAACCTCTCG TTATCTTTTT ATTCGCCGCA
CTTGGTTTAA TTATTCTACA AAATACAGTC GGTATCGGAA CCTCTATGCT TGTTGGTTTA
GATCCTGCTT ACGGGTTAAT CGCAGGCTCC GTTACATTAA CGGGTGGTCA TGGTACAGGA
GCTGCTTGGG CAGAAACTTT AAGTAATCGT TTTGGCATTC AAGGGGCGTT GGAACTGGCA
ATGGCTTGTG CGACATTCGG TTTGGTTTTC GGGGGAATTA TCGGTGGACC GGTAGCTAGA
TTCTTATTGA AACGCTTGCA TAAAGCGGAA GTACCGGAAG ATGAAAATGT GGACGATATA
GAAGAGGTAT TTGAAAAGCC CGTATATCGC CGCAAAATCA ATACTCGTTC AATTATTGAA
ACCATTACGA TGATGTCCGT GTGTCTGATT GTCGGGCAAT ATTTAGATGT GCTTACAAAA
GGAACCGCAC TTCAATTACC GACGTTTGTT TGGTGTTTAT TTACCGGTAC GGTAATTCGT
AATGCACTCG CTCATGTTGT GAAGTTCAAA GTAGCGGATG AGGCAATTGA TGTGTTAGGT
ACAGTGGGTT TATCACTATT TTTAGCTATC GCATTGATGT CTTTAAAACT TTGGGAATTG
GCTGGATTAG CATTACCAAT TTTAGTCGTA TTGTTAGCAC AGGTTGTGGT AATGGCTACC
TATTCTATTT TTGTGACTTA TCGCATGATG GGACGTGATT ATGATGCCGT TGTATTAAGT
GCGGGGCATT GTGGTTTCGG CTTGGGGGCG ACACCAACAG CCGTTGCGAA TATGCAAGCA
GTTACTTCTC ATTTCGGACC GTCTCACAAA GCGTTTTTAA TTGTGCCTAT GGTTGGTGCA
TTCTTTATCG ATCTGTTAAA TAGCGTAGCA TTAAACATCT TTTTAAATAT TGTTGATGTT
TTACATTAA
 
Protein sequence
MTFGTYETVA LACLVLLLGY FLVKRVHFLS EYNIPEPVVG GFIVAIILSI VHHFWDMSFS 
FDTKLQTTMM LVFFSSIGLS ANFARLAKGG KPLVIFLFAA LGLIILQNTV GIGTSMLVGL
DPAYGLIAGS VTLTGGHGTG AAWAETLSNR FGIQGALELA MACATFGLVF GGIIGGPVAR
FLLKRLHKAE VPEDENVDDI EEVFEKPVYR RKINTRSIIE TITMMSVCLI VGQYLDVLTK
GTALQLPTFV WCLFTGTVIR NALAHVVKFK VADEAIDVLG TVGLSLFLAI ALMSLKLWEL
AGLALPILVV LLAQVVVMAT YSIFVTYRMM GRDYDAVVLS AGHCGFGLGA TPTAVANMQA
VTSHFGPSHK AFLIVPMVGA FFIDLLNSVA LNIFLNIVDV LH