Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0185 |
Symbol | lspA |
ID | 4239696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 166327 |
End bp | 166824 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638103717 |
Product | lipoprotein signal peptidase |
Protein accession | YP_718392 |
Protein GI | 113460331 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAT CAAAAACAGG ACTTCCATTT CTTTGGATAA GTGCGGTTGC TTTTTTTACT GATTTAATAA CAAAACTCGC TGTAGTAAAA AATTTTTCTT TATACGAAAG TATTAATATA TTGCCTTTCT TTAATTTAAC TTACGTGCGT AATCACGGGG CAGCCTTTAG CTTTTTGGCT GACCATGCAG GTTGGCAAAA ATACTTTTTT ATTTTATTGG CTTTAGTCGT TTCCTTCATG ATTTTATTTT TCTTATATAA AAATCAAGCA ACACAAAAAC TACAAAATAC AGGCTATGCG TTAATGGTTG GTGGAGCTTT GGCAAACGCA GCCGATAGAG CTTATCATGG CTTTGTGGTA GATTTTTTTG ATTTTTATTG GCAACAATGG CATTACCCCG TATTTAATAT CGCTGATGTT GCAATTTGTA TTGGTGCCGG ATTATTGGCT ATTGATGCTT TTAAGCAAAA CGATAAAAAA GAGAGCAAGC AGAACTAA
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Protein sequence | MNLSKTGLPF LWISAVAFFT DLITKLAVVK NFSLYESINI LPFFNLTYVR NHGAAFSFLA DHAGWQKYFF ILLALVVSFM ILFFLYKNQA TQKLQNTGYA LMVGGALANA ADRAYHGFVV DFFDFYWQQW HYPVFNIADV AICIGAGLLA IDAFKQNDKK ESKQN
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