| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0173 |
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| Symbol | rho |
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| ID | 4239684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 153043 |
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| End bp | 154242 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638103705 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_718380 |
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| Protein GI | 113460319 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.770214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCTTAG AAAATTTAGC TCGTTTACGC AAACAAGACA TTATTTTTGC AATTTTAAAA
CAACATGCGA AAAGTGGAGA GGATATTTTT GGAGGAGGCA TATTAGAAAT TTTACCTGAT
GGTTTCGGTT TCTTACGTTC TGCCGATAGT TCTTACTTAG CCGGTCCTGA TGACATATAT
GTTTCTCCAA GTCAGATTCG TCGTTTCAAC CTGCAAACGG GCGACAAAAT TGAAGGAAAA
ATTCGTCCGC CAAAAGAAGG AGAGCGTTAC TTTGCCTTAC TAAAAGTTGA TCGAGTCAAT
GACGATAAAC CAGAGGTATC ACGTAGTAAA ATTCTCTTTG AAAACTTAAC TCCACTACAC
GCAAATTCAC GCCTCAGAAT GGAGCGTGGA AATGGTTCAA CGGAAGATTT GACTGCTCGT
ATTTTAGATT TAGCCTCCCC TATCGGTAAA GGACAACGTG GTTTAATTGT CGCTCCGCCA
AAAGCAGGTA AAACCATGTT GTTACAAAAT ATTGCACAAA GTATTATTCA TAACTATCCG
GAATGTGAAT TAATTGTATT GTTGATTGAT GAACGTCCGG AAGAAGTAAC AGAAATGCAA
CGCTCAGTAA AAGGCGAAGT AATTGCTTCA ACCTTTGATG AACCGGCAGC ACGCCATGTT
CAAGTTGCAG AAATGGTGAT TGAAAAAGCA AAACGCTCCG TTGAACATAA AAAAGATGTG
GTTATTTTAT TAGATAGCAT AACTCGCTTA GCTCGTGCTT ATAATACGGT AACACCGGCT
TCCGGAAAAA TCTTATCAGG GGGTGTAGAT GCCAATGCAT TGCATCGCCC AAAACGCTTC
TTTGGTGCGG CCCGTAATGT TGAGGAAGGC GGTAGTTTAA CCATTATTGC CACCGCACTT
GTGGATACCG GATCAAAAAT GGACGAAGTG ATTTTTGAAG AATTTAAAGG AACTGGGAAT
ATGGAGTTGC ATCTTTCCCG TAAAATCGCA GAAAAACGTG TATTTCCTGC TATTGACTTC
AATCGTTCTG GTACAAGGAA AGAAGATCTT CTGACTACAC CAGATGAATT ACAAAAAATG
TGGATTCTAC GTAAAATTCT TAATCCAATG GGTGAAATTG AGGCAATGGA ATTCTTAATT
GATAAGCTAA TGATGGCAAA AACCAATGAA GAATTTTTTG AAGTTATGAA ACGTTCTTAA
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| Protein sequence | MGLENLARLR KQDIIFAILK QHAKSGEDIF GGGILEILPD GFGFLRSADS SYLAGPDDIY
VSPSQIRRFN LQTGDKIEGK IRPPKEGERY FALLKVDRVN DDKPEVSRSK ILFENLTPLH
ANSRLRMERG NGSTEDLTAR ILDLASPIGK GQRGLIVAPP KAGKTMLLQN IAQSIIHNYP
ECELIVLLID ERPEEVTEMQ RSVKGEVIAS TFDEPAARHV QVAEMVIEKA KRSVEHKKDV
VILLDSITRL ARAYNTVTPA SGKILSGGVD ANALHRPKRF FGAARNVEEG GSLTIIATAL
VDTGSKMDEV IFEEFKGTGN MELHLSRKIA EKRVFPAIDF NRSGTRKEDL LTTPDELQKM
WILRKILNPM GEIEAMEFLI DKLMMAKTNE EFFEVMKRS
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