Gene HS_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0171 
SymbolrplJ 
ID4239682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand+ 
Start bp151892 
End bp152383 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content42% 
IMG OID638103703 
Product50S ribosomal protein L10 
Protein accessionYP_718378 
Protein GI113460317 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0111095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAA ATCTTCAAGA CAAACAAGCA ATTGTTGCTG AAGTAAATGA AGCAGCCAAA 
GGTGCCCTAT CGGCAGTTAT TGCGGATTCT CGTGGTGTTA CTGTTGATAA AATGACTGAG 
TTACGTAAAG CAGCTCGTGA AGCTGGCGTT TCTATGCGTG TTGTACGTAA TACTTTATTA 
CGTCGTGCAG TAGAAGGCAC AGCTTTTGAG TGCTTAACAG ATACGTTTGT AGGTCCAACA 
CTTATCGCAT TTTCTAATGA GCATCCAGGT GCAGCTGCAC GTTTGTTCAA GGATTTTGCT 
AAAGCTAACG ATAAGTTTGA AATTAAAGGT GCAGCCTTTG AAGGTAAGAT CCAAAATGTT 
GAGTTCTTAG CAACATTACC GACTTACGAA GAAGCAATTG CACGTTTAAT GGGTACTATG 
AAAGAAGCAG CGGCAGGCAA ACTTGCTCGC ACTCTTGCGG CATACCGCGA CAAATTACAA 
GAAGCGGCTT AA
 
Protein sequence
MALNLQDKQA IVAEVNEAAK GALSAVIADS RGVTVDKMTE LRKAAREAGV SMRVVRNTLL 
RRAVEGTAFE CLTDTFVGPT LIAFSNEHPG AAARLFKDFA KANDKFEIKG AAFEGKIQNV 
EFLATLPTYE EAIARLMGTM KEAAAGKLAR TLAAYRDKLQ EAA