| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0170 |
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| Symbol | rplA |
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| ID | 4239681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 150919 |
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| End bp | 151608 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638103702 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_718377 |
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| Protein GI | 113460316 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000255215 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAC TTACTAAGCG TATGAAAGCA ATCAAAGCCG GTGTTGATTC AACAAAACAA
TATGAAATCA ATGAAGCTAT TACGGTGTTG AAACAATTCA CTTCAACAAA ATTCGTTGAA
AGCGTTGACG TTGCAGTCAA TTTAGGTATT GATGCACGTA AATCAGATCA AAATGTACGT
GGTGCAACCG TGTTACCACA TGGTACAGGT CGTTCAGTAC GTGTTGCTGT GTTTACTCAA
GGTGCTAATG TTGATGCGGC TAAAGCAGCT GGTGCTGATT TAGTAGGAAT GGAAGATTTA
GCAGAGCAAA TCAAAAAGGG TGAAATGAAC TTTGATGTTG TTATTGCTTC CCCTGATGCA
ATGCGTGTTG TTGGTCAACT AGGTCAAATT TTAGGGCCTA GAGGCTTAAT GCCAAATCCT
AAAGTTGGTA CCGTTACACC AAACGTTGCT GAAGCGGTTA AAAATGCTAA GTCCGGTCAA
ATCCGTTACC GCAATGATAA AAACGGTATT ATTCATACTA CAATCGGTAA AGCAAATTTC
TCTGCTGAAC AATTAAAAGA AAACTTGCAA GCATTATTAG CTGCCTTGAC TAAGGCGAAG
CCTGCGACAG CAAAAGGTAT CTTTATTAGA AAAGTAAGTG TTTCTACTAC TCAAGGTGCA
GGCGTTGCTG TTGATCAAAG TAGCTTATAA
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| Protein sequence | MAKLTKRMKA IKAGVDSTKQ YEINEAITVL KQFTSTKFVE SVDVAVNLGI DARKSDQNVR
GATVLPHGTG RSVRVAVFTQ GANVDAAKAA GADLVGMEDL AEQIKKGEMN FDVVIASPDA
MRVVGQLGQI LGPRGLMPNP KVGTVTPNVA EAVKNAKSGQ IRYRNDKNGI IHTTIGKANF
SAEQLKENLQ ALLAALTKAK PATAKGIFIR KVSVSTTQGA GVAVDQSSL
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