Gene HS_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0152 
Symbol 
ID4239662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp137231 
End bp137968 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content41% 
IMG OID638103683 
Product23S rRNA (guanosine-2'-O-)-methyltransferase 
Protein accessionYP_718358 
Protein GI113460298 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAA ATATTTATGG AATTCATGCG GTGCAGGCTT TTCTTATTAA TGCACCAGAA 
CGTTTGATCG AAGTTTATGT GCTAAAAGGG CGGGAAGATA AGCGGTTACA ATCCGTACTG
AATGAACTTT ATAAATTAGG TATAAGCGTA CAATTTTTGA ATCGTGATAC ATTGGATAAA
AAAGCGAACG GAGAAGTACA TCAAGGTATC ATTGCTCGTG TTCAACCAGC TAAAGAGTTG
AATGAAAATG ACTTGGTTGA GATCTTACAA AAAAAAGCAA ATCCATTATT GCTGGTATTG
GATGGTATCA CAGATCCGCA TAATTTAGGT GCTTGTTTAC GATCAGCAGA TGCTGCCGGT
GTTTGTGCTG TGATTGTGCC AAAAGATAAA TCGGCACAAT TGACTGCGAT TGCTCGTAAA
GTCGCTTGTG GAGCGGCGGA GGTGGTTCCT CTTGTTCGTG TAACAAATTT AGCCCGCACT
TTACGAGATC TACAGCAACA ACATAATATT TGGGTTGTAG GTACGGCAGG CGAGGCGATT
GAAACTTTAT ACGAAGCGAA ATTAACCGGC GGTTTAGCAC TTGTTATGGG GGCTGAGGGA
GATGGAATGC GTCGTTTAAC CCGTGAAACT TGCGATCAAT TGATTAGCAT TCCTATGGCG
GGTTCCGTCT CTTCATTAAA TGTTTCTGTT GCCACAGGCA TTTGTCTATT TGAAATTGTG
CGACAAAGAT TAGGGTAA
 
Protein sequence
MAENIYGIHA VQAFLINAPE RLIEVYVLKG REDKRLQSVL NELYKLGISV QFLNRDTLDK 
KANGEVHQGI IARVQPAKEL NENDLVEILQ KKANPLLLVL DGITDPHNLG ACLRSADAAG
VCAVIVPKDK SAQLTAIARK VACGAAEVVP LVRVTNLART LRDLQQQHNI WVVGTAGEAI
ETLYEAKLTG GLALVMGAEG DGMRRLTRET CDQLISIPMA GSVSSLNVSV ATGICLFEIV
RQRLG