Gene HS_0138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0138 
SymbolrecF 
ID4239647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp124685 
End bp125761 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content37% 
IMG OID638103668 
Productrecombination protein F 
Protein accessionYP_718343 
Protein GI113460284 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATAT CACGCTTAAT CATCAATCAT TTCCGCAACT TAACAGCCAT AGATCTGGAA 
TTTGAACGTG GCTTTAACTT TATTATCGGC AACAATGGAA GCGGGAAAAC AAGTTTACTG
GAAGCTATTT TTTATTTAGG GCACGGACGC TCATTTAAAA GTGCGGTTGC AAATAGAATA
ATTTCTTATC AGCAACCGCA CTTTATTTTA CATGGTAAAA TTCAAGAGCA ACAACATCAA
TGGTCTGTTG GTTTGCAAAA ACAACGTCAA GGTAACACTT TAATGAAAAT AAACGGCGAG
GACGCAAAAA AAATTTCCGA TCTTGCCCAT TTATTGCCCA TGCAACTCAT TACACCTGAA
GGATTAACCT TATTAAATGG CGGTCCCAGC TATCGAAGGG CTTATTTAGA TTGGGGGTTA
TTTCATCATA ACGCATCATT TTATAATGCT TGGAGTAGCT TAAATCGTTT ACTTAAACAA
CGAAATTCTG CCTTACAACA AGTTTGTTCT TATGAAAAAC TCAAAATTTG GGATAGAGAA
TTAACCAAAC TTGCTTATCA AGTGAGCTAC TGGCGAGAAG CGTATGCGGA AGCCTTACGC
TCGGAAATAG AAAAAACCTG TCAGCTTTTT CTACCTGAAC TAGAAATTTC TGTTAGCTTT
CATCAAGGCT GGGATAAAAA TATGGACTAT GCGGATCTGT TACAACAAAA CTTTGAGCGA
GATCGTGCTT TGGGTTATAC CTTTTCCGGA CCTCAAAAAG CAGATTTTCG TTTTAAAGCA
AACGGATTGC CGGTTGAAGA TATTTTATCT CGTGGACAAT TAAAATTGTT AATGTGTGCA
TTACGTTTGG CTCAAGGTGA GCATTTAATG CAACAAAAAA AACGCCACTG TATTTTTCTA
CTTGACGATT TCGCTTCAGA ATTGGATCAA TATAAACGCA CATTGCTTGC TGAACGCTTA
CAAAAAAATG GTTCGCAAGT TTTTGTTACT GCAATAACTC AAGAACAATT ACAACAGATA
CAACCAGAAA AGCACCGCAC TTTTTACCTT GAAAACGGAA GAATAAAAGA TCTTTAA
 
Protein sequence
MAISRLIINH FRNLTAIDLE FERGFNFIIG NNGSGKTSLL EAIFYLGHGR SFKSAVANRI 
ISYQQPHFIL HGKIQEQQHQ WSVGLQKQRQ GNTLMKINGE DAKKISDLAH LLPMQLITPE
GLTLLNGGPS YRRAYLDWGL FHHNASFYNA WSSLNRLLKQ RNSALQQVCS YEKLKIWDRE
LTKLAYQVSY WREAYAEALR SEIEKTCQLF LPELEISVSF HQGWDKNMDY ADLLQQNFER
DRALGYTFSG PQKADFRFKA NGLPVEDILS RGQLKLLMCA LRLAQGEHLM QQKKRHCIFL
LDDFASELDQ YKRTLLAERL QKNGSQVFVT AITQEQLQQI QPEKHRTFYL ENGRIKDL