Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0123 |
Symbol | rpiA |
ID | 4239631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 111246 |
End bp | 111905 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638103652 |
Product | ribose-5-phosphate isomerase A |
Protein accession | YP_718327 |
Protein GI | 113460269 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0120] Ribose 5-phosphate isomerase |
TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCAGT TAAGCATGAA AAAAATGGCT GCTCAAGCTG CACTGCAATA TGTTAAGCCT GATAGCATTA TTGGCGTAGG AAGCGGTTCA ACTGTCAACT GTTTTATTGA AGTATTAGGT ACAATAAAAG AAACAATCAA AGGTGCTGTC GCAGCTTCAA AAGCATCAGA AGAATTATTA CTCCGACAAG GTATCGAGGT ATTCAGTGCA AATGATGTAT CCGGTTTAGA TATTTATGTC GATGGTGCAG ATGAAATTAA TCCGCAAAAA ATGATGATTA AAGGTGGCGG AGCAGCATTG ACACGTGAAA AAATTGTAGC TGCATTGGCA AAAAAATTCA TATGTATAGT AGACAGTTCT AAACAAGTGG ATGTATTAGG CTCAACGTTC GCTTTGCCGA TAGAGGTGAT TCCAATGGCT CGCTCTCAAG TTGCACGCAA ATTAGTGGCG TTGGGCGGTT CACCTGAATA TCGTGAAAAT GTGGTTACAG ATAATGGTAA TGTTATTTTA GATGTATATA ACTTTAAAAT TATGAATCCG ATAGAAATGG AAAAAGAATT GAATAATGTG GCCGGCGTGG TAACAAATGG GATTTTTGCT TTACGTTCTG CAGATATTGT TATTGTAGGT ACGCCGGAGG GTACAAAAAT TATTGAATAA
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Protein sequence | MDQLSMKKMA AQAALQYVKP DSIIGVGSGS TVNCFIEVLG TIKETIKGAV AASKASEELL LRQGIEVFSA NDVSGLDIYV DGADEINPQK MMIKGGGAAL TREKIVAALA KKFICIVDSS KQVDVLGSTF ALPIEVIPMA RSQVARKLVA LGGSPEYREN VVTDNGNVIL DVYNFKIMNP IEMEKELNNV AGVVTNGIFA LRSADIVIVG TPEGTKIIE
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