Gene HS_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0122 
SymbolserA 
ID4239630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp109988 
End bp111220 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content37% 
IMG OID638103651 
ProductD-3-phosphoglycerate dehydrogenase 
Protein accessionYP_718326 
Protein GI113460268 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID[TIGR01327] D-3-phosphoglycerate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAA AAGTATCACT AGATAAATCA AAAATTAAGT TTTTGCTTTT GGAGGGAATA 
CACCAAAATG CACTGGAGGT GTTAAAAGCA GCAGGATATA CCAATATCGA ATATCATCGA
AAGGCCTTAG AACCTGATGA ATTAAAAATT GCTATCAAAG ATGCACATTT TATCGGTATT
CGTTCTCGAA CGTCTTTAAC GGAGGATATA TTAGCAGAAG CAACAAAATT AATTGCAATT
GGTTGTTTTT GTATCGGCAC AAATCAAGTG GATTTAGAGG CGGCAAAAGC ACGTGGTATT
CCTGTTTTCA ATGCACCGTT TGCCAATACC AGATCTGTGG CTGAATTAGT GCTTGGTGAG
ATCTTATTAT TAATGCGTAA TATCCCGCAA GCCAATGCCG ATGTGCATCG AGGTTTATGG
AATAAATCCA TGGTGGGATC TTATGAGGTT CGTGGAAAAC GCTTGGGTAT TATTGGTTAT
GGTCATATTG GATCTCAACT AAGTATTATT GCAGAAGCGT TAGGCATGAA TGTGTATTTC
TATGATATAG AAACAAAATT ACCTTTAGGT AATGCACAAC AAATGAATAG CTTAGAAGAA
CTTTTGAGTA CCTGTGATGT GGTTTCATTA CATTTGCCGG AAAATTCCTC AACAAAAAAT
TTAATGAATG CGGAACGCAT TGCACAATTA AAGGCGAACT GTATTTTTAT CAATGCTGCC
CGTGGCACAG TGGTTGATAT TGACGCTTTA GCTCAGGCGT TAGAAAGCAA AAAAATTCGT
GGTGCCGCAA TTGATGTATT CCCGAAAGAA CCTGCCTCGA TTGAAGAGGA ATTTATCTCG
CCATTGCGTG CTTTCGATAA TGTTATCCTA ACACCACACA TTGGTGGCTC AACTGTTGAA
GCACAAGAAA ATATTGGAGT TGAAGTCGCA AATAAATTTG TCAAATATTC CGATAATGGT
TCAACACTGT CGGCAGTAAA TTTCCCAGAA GTATCTCTAC CGGAACATAG TAATGCAAAA
CGCTTATTAC ATATTCACCA TAACCGTCCG GGGATTTTAA ATAAAATCAA TCAAATATTT
GTGGAGCAAA ATATCAATAT TGCGGCTGAA TATTTACAAA CCGAGGCAAA AATTGGTTAT
GTGGTAATCG ATGTTGAAAC AGAAGATACC GCTCAATTAT TGGCTAAACT TAAGCAAATT
GAAGGCACTA TTCGTGCGAG AGTATTATTT TAA
 
Protein sequence
MTTKVSLDKS KIKFLLLEGI HQNALEVLKA AGYTNIEYHR KALEPDELKI AIKDAHFIGI 
RSRTSLTEDI LAEATKLIAI GCFCIGTNQV DLEAAKARGI PVFNAPFANT RSVAELVLGE
ILLLMRNIPQ ANADVHRGLW NKSMVGSYEV RGKRLGIIGY GHIGSQLSII AEALGMNVYF
YDIETKLPLG NAQQMNSLEE LLSTCDVVSL HLPENSSTKN LMNAERIAQL KANCIFINAA
RGTVVDIDAL AQALESKKIR GAAIDVFPKE PASIEEEFIS PLRAFDNVIL TPHIGGSTVE
AQENIGVEVA NKFVKYSDNG STLSAVNFPE VSLPEHSNAK RLLHIHHNRP GILNKINQIF
VEQNINIAAE YLQTEAKIGY VVIDVETEDT AQLLAKLKQI EGTIRARVLF