Gene HS_0089 details

Gene Information

• Locus tag: HS_0089
• Symbol: ribB
• ID: 4239598
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 82323
• End bp: 82961
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 638103621
• Product: 3,4-dihydroxy-2-butanone 4-phosphate synthase
• Protein accession: YP_718296
• Protein GI: 113460238
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
• TIGRFAM ID: [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCAGT CATTATTATC TCAGTTTGGT ACATCTGAAG AACGAGTTAA ACGTGCGATT 
GAAGCTTTCA AAAGAGGGAA CGGAGTTCTT GTCCTTGATG ACGAAGATCG GGAAAATGAG 
GGTGATCTTA TTTTTCCGGC TGAAACAATC ACAGTTGAAC AGATGGCAAA ATTAATTCGT 
TATGGGAGCG GAATTGTTTG CTTATGTATC ACTGATGAAC TTTGCCAACA GCTCGATTTG 
TCACCGATGG TACAAAATAA CACAAGTATT AATCAAACAG CGTTTACTGT CAGTATTGAA 
GCGGCACAAG GTGTATCTAC CGGTGTATCT GCACAAGATC GTGTAACGAC TATTCAAGCC 
GCCATTGCTG ATAATGCTAA ACCGCAAGAC CTTAGCCGTC CGGGGCATGT ATTTCCATTA 
AGGGCTAAAA AGGGCGGTGT GTTAGCACGG CGGGGACATA CTGAGGCCGC AGTTGATCTG 
GCTTCTTGGG CAGGTCATAA GCCTGCCGGG GTAATTTGTG AAATAACCAA TGATGATGGG 
AGTATGGCAA GAACACCGGA GATCGTAGAA TTTGGCAAAA AATTTAATTA CCCTGTGGTA 
ACAATTGAGG ATCTTGTCCG TTATGCCTCA AATAAATAG 

 

Protein sequence

MNQSLLSQFG TSEERVKRAI EAFKRGNGVL VLDDEDRENE GDLIFPAETI TVEQMAKLIR 
YGSGIVCLCI TDELCQQLDL SPMVQNNTSI NQTAFTVSIE AAQGVSTGVS AQDRVTTIQA 
AIADNAKPQD LSRPGHVFPL RAKKGGVLAR RGHTEAAVDL ASWAGHKPAG VICEITNDDG 
SMARTPEIVE FGKKFNYPVV TIEDLVRYAS NK