| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0083 |
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| Symbol | rpsD |
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| ID | 4239592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 77551 |
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| End bp | 78171 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638103615 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_718290 |
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| Protein GI | 113460232 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000323728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAGAT ATTTGGGTCC TAAGCTCAAG CTAAGCCGCC GTGAAGGCAC TGACTTATTC
CTTAAGTCTG GTGTGCGTGC TATTGATACA AAATGTAAAA TTGATACAGC ACCTGGTCAG
CATGGTGCTC GTAAACCGCG TTTGTCAGAT TATGGTAGTC AATTACGTGA AAAGCAAAAA
GTTCGCCGTA TTTACGGTAT TTTAGAACGT CAATTCCGTA ACTATTATAA AGAAGCAAAC
CGCTTAAAAG GTAATACTGG GGAGAATTTA CTGGTATTAT TGGAAGGACG ATTGGATAAC
GTTGTTTATC GCATGGGCTT TGCTGCAACT CGCGCTGAGG CTCGTCAATT AGTGAGTCAC
AAAGCGATTG TTGTAAATGG TCGTGTAGTT AATATCCCAT CTTTCCAAGT TTCAGTTAAT
GATGTTGTTG CTGTTCGTGA AAAATCTAAA AAGCAAGCAC GTATTAAAGC ATCATTAGAA
TTAGCAGAGC AGAGAGAAAG ACCAACTTGG TTGGAAGTCG AAGCAGCTAA AATGGAAGGT
GTGTTCAAAC GTGTTCCTGA GCGTTCTGAT TTATCAGCAG ACATTAACGA ACATCTGATC
GTAGAGCTTT ACTCTAAATA A
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| Protein sequence | MARYLGPKLK LSRREGTDLF LKSGVRAIDT KCKIDTAPGQ HGARKPRLSD YGSQLREKQK
VRRIYGILER QFRNYYKEAN RLKGNTGENL LVLLEGRLDN VVYRMGFAAT RAEARQLVSH
KAIVVNGRVV NIPSFQVSVN DVVAVREKSK KQARIKASLE LAEQRERPTW LEVEAAKMEG
VFKRVPERSD LSADINEHLI VELYSK
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