Gene HS_0060 details

Gene Information

• Locus tag: HS_0060
• Symbol: rplD
• ID: 4239568
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 64102
• End bp: 64704
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638103591
• Product: 50S ribosomal protein L4
• Protein accession: YP_718266
• Protein GI: 113460209
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000000107913
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATTAC AAGTTGTAGG TGCAAACGCA CTCACTGTTT CTGAAACTAC CTTCGGACGT 
GAGTTTAACG AAGCGTTAAT CCACCAAGTG GTTGTTGCTT ATGCAGCAGG TGCTCGTCAG 
GGTTCTCGTG CACAAAAAAC GCGTGCTGAA GTGTCTGGTT CAGGCAAAAA ACCTTGGCGT 
CAAAAAGGTA CAGGTCGTGC GCGTTCCGGT GATATTAAAT CACCAATTTG GCGTTCAGGT 
GGCGTAACTT TTGCAGCGAA ACCACAAGAT CACAGCCAAA AAGTGAACAA AAAAATGTAC 
CGCGGTGCGA TTAAAAGCAT TCTTTCTGAA TTAGTTCGTC AAGACCGTTT GGTTGTGGTG 
GAAAAATTCG AAATTGATGC ACCAAAAACA AAAGTATTAG TACAAAAATT AAAAGATATG 
GCGTTAACTG ACGCGCTTAT CATCACTGCA AGTTTAGATG AGAATCTATT CTTAGCGGCA 
CGTAACTTAT ATAAAGTTGA TGTTCGTGAT GTGCAAGCTA TTGATCCGGT TAGCTTAATC 
GCATTCGATA AAGTTGTTGT AACTGTAGAT GCGGTAAAAC AAATTGAGGA GATGTTCGCA 
TGA 

 

Protein sequence

MELQVVGANA LTVSETTFGR EFNEALIHQV VVAYAAGARQ GSRAQKTRAE VSGSGKKPWR 
QKGTGRARSG DIKSPIWRSG GVTFAAKPQD HSQKVNKKMY RGAIKSILSE LVRQDRLVVV 
EKFEIDAPKT KVLVQKLKDM ALTDALIITA SLDENLFLAA RNLYKVDVRD VQAIDPVSLI 
AFDKVVVTVD AVKQIEEMFA