Gene HS_0059 details

Gene Information

• Locus tag: HS_0059
• Symbol: rplC
• ID: 4239567
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 63460
• End bp: 64086
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 638103590
• Product: 50S ribosomal protein L3
• Protein accession: YP_718265
• Protein GI: 113460208
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000000158228
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGGTT TAGTCGGTCG TAAAGTTGGT ATGACTCGTA TCTTCAATGA AGATGGGGTG 
TCAATTCCAG TTACCGTAAT CGAAATTGAA GCCAACCGTG TGACTCAAGT TAAAACTCTT 
GAAAACGATG GCTATACTGC AGTTCAGGTT ACTACTGGTT TTAAAAAAGC AAGTCGTGTA 
ACCAAGCCTG AAGCAGGTCA TTTCGTGAAA GCAGGTGTTG AAGCTGGTCG CGGTTTATGG 
GAATTTCGTA CTGAAGGTGA AGAATTCACT TTAGGTCAAG AAATCAATGT TGACATCTTT 
ACAGATGTTA AAAAAGTAGA TGTTACTGGG ACATCAAAAG GTAAAGGTTT CCAAGGCGGT 
GTTAAACGCT GGAATTTCCG TACTCAAGAT GCAACTCATG GTAACTCTTT ATCACATCGT 
GTGCTTGGTT CTATTGGTCA AAACCAAACT CCAGGCCGTG TGTTTAAAGG TAAAAAAATG 
GCTGGACATT TAGGTGCTGA ACGCGTTACT GTTCAATCAC TTGAAATTGT TCGTGTTGAT 
GTTGAACGTA AATTACTATT AGTGAAAGGG TCTGTACCTG GTGCAACTAA TAGTGATGTT 
ATCGTTAAAC CAGCAGTTAA AGCATAA 

 

Protein sequence

MIGLVGRKVG MTRIFNEDGV SIPVTVIEIE ANRVTQVKTL ENDGYTAVQV TTGFKKASRV 
TKPEAGHFVK AGVEAGRGLW EFRTEGEEFT LGQEINVDIF TDVKKVDVTG TSKGKGFQGG 
VKRWNFRTQD ATHGNSLSHR VLGSIGQNQT PGRVFKGKKM AGHLGAERVT VQSLEIVRVD 
VERKLLLVKG SVPGATNSDV IVKPAVKA