Gene HS_0051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0051 
Symbolego 
ID4239559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp56274 
End bp57782 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content39% 
IMG OID638103582 
ProductABC transporter, ATP-binding, sugar transport 
Protein accessionYP_718257 
Protein GI113460200 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000186076 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAGA CAGAATCTAA TCCTACACCT TTACTGGAAG CTTGTGATGT AAGTAAAGCT 
TTCTCTGGTG TTGAAGTACT AAAATCCATT AACTTTTCCC TTTATTCTGG GCAGGTACAT
ACTCTACTGG GTGGAAACGG TGCTGGCAAA TCAACCTTGA TGAAAATTAT TGCCGGTATT
CAGTTGCAAG ATACCGGCAC GTTAAAAATT CATGGCAAAG TCCGAACCAA TTTAACACCA
AGCAAGGCAC ATCAATTAGG TATTTACCTT GTTCCGCAAG AACCTTTGTT ATTTTCTAAT
TTGAGTGTCA AAGAGAATAT TTTATTCGGT TTGCCAAGAA CAATGGATTT ACAGTCAAAG
CTCACAGCGT TGTTGACGGA ACTAAACTCA CATTTAAATT TGGATATGCA GGCTGGTTTA
TTAGATGTTG CTGATCAGCA GTTAGTTGAA ATTATGCGAG GCTTAATGAG AGATGCTCAG
ATTCTGATTT TAGATGAACC TACCGCCTCA TTAACACCAG TGGAAACCGA AAATTTATTC
GGACAGATAA ATTCCTTACT CGTCAAAGGG GTAGGGATTG TTTTTATTTC GCATAAATTG
TCTGAAGTTT GGCAAATTGC TGATTGGGTG AGTGTAATGC GAGATGGTTA CATTGCCTTA
AGCGAGCCAA TTGACAAGAT CAATCACGAC GATGTTATTC AGGCGATTAC TCCTCGAGCT
AAAAATGCAT CATTAACAGA AAGTCAGCAG TTGTGGTTGG ATTTACCAGG GCATAAGAGG
GTGAAATCGA CCGAATTTCC ATTATTGACA GTAGAAAATT TCACTGGTGA AGGATTCCGA
GATATCAACT TTGAAATTTA TCCTGGCGAG ATTTTAGGAT TAGCAGGCGT AGTCGGCTCA
GGTAGAACCG AATTAGCTGA AACGCTGTAT GGTTTGCGTA AAGCCAAATC CGGTAAAGTG
ATATTTTGTG ATGAGCTAAT TAATTCACTG TCCGTTAAGC AACGGCTTAA ACGAGGCTTA
GTGTATTTGC CCGAAGATAG GCAAGCCTCT GGATTGCATT TAGATTCACC ATTAAGTTGG
AATACCTGCG GATTAACCTA TCATGATATG GGCTTTTGGA TTGATGAGTC CAAGGAGAAA
GCAATTTTAG AACGCTATTA CCATGCTATC GGAATAAAAT TTAATCATGT TGAGCAATCG
GTACGTACCT TATCAGGTGG TAATCAGCAA AAAATTTTGA TCGCAAAATG TTTGGAAGCC
GATCCTCGGT TGTTGATTGT TGATGAGCCA ACTCGTGGCG TTGATATTGG TGCGAGAGCA
GATATTTATC AATTAATAAA AAGTATTGCC AAACAAAATG TAGCCGTGTT GTTCATTTCA
TCTGACTTGG AGGAAATAGA ACAAATGTCT AGTCGAGTTT TGGTAATGCA CGACGGTAAG
CTTAGTCAAT CGTTGAAAGG TGAAGATATC AATACTGATA ATATTATGCG ACTGGCATTC
AGTAGTTAG
 
Protein sequence
MKETESNPTP LLEACDVSKA FSGVEVLKSI NFSLYSGQVH TLLGGNGAGK STLMKIIAGI 
QLQDTGTLKI HGKVRTNLTP SKAHQLGIYL VPQEPLLFSN LSVKENILFG LPRTMDLQSK
LTALLTELNS HLNLDMQAGL LDVADQQLVE IMRGLMRDAQ ILILDEPTAS LTPVETENLF
GQINSLLVKG VGIVFISHKL SEVWQIADWV SVMRDGYIAL SEPIDKINHD DVIQAITPRA
KNASLTESQQ LWLDLPGHKR VKSTEFPLLT VENFTGEGFR DINFEIYPGE ILGLAGVVGS
GRTELAETLY GLRKAKSGKV IFCDELINSL SVKQRLKRGL VYLPEDRQAS GLHLDSPLSW
NTCGLTYHDM GFWIDESKEK AILERYYHAI GIKFNHVEQS VRTLSGGNQQ KILIAKCLEA
DPRLLIVDEP TRGVDIGARA DIYQLIKSIA KQNVAVLFIS SDLEEIEQMS SRVLVMHDGK
LSQSLKGEDI NTDNIMRLAF SS