Gene HS_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0041 
Symboldef 
ID4239549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp43616 
End bp44128 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content35% 
IMG OID638103572 
Productpeptide deformylase 
Protein accessionYP_718247 
Protein GI113460190 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAT TGAATGTATT AATTTATCCC GATGAACGCT TAAAAACGGT CGCAGAACCT 
GTAAGCGTTT TTGACGAAGA ATTACAAACC TTTATTGATA ATATGTTTGA AACGATGTAT
CACGAAGAAG GGATTGGTTT AGCCGCAACA CAAGTAAATG TACATAAGCG TATTATCACG
ATCGATATTG AAGGAACTAA AGAAAATCAA ATTGTGTTGA TTAACCCTGA GATTCTTGAA
AGTTTCGGTG AAACAGGTAT TGAAGAAGGT TGCCTATCAT TACCTGGTTT ACGTGGTTTT
GTGCCTCGTA AAGAGACTGT AAAAGTAAAA GCACAAAATC GTCAGGGAGA AGATTTTATG
CTAGATGCAG ATGGTTTGTT GGCCATTTGT ATTCAACACG AGATAGATCA TTTAAATGGT
ATTGTTTTTG CTGATCATTT GTCGCCATTA AAACGCCAAC GCATGAAAGA AAAACTACTC
AAATTGCAAA AACAGATCGC AAAAAATCGT TAA
 
Protein sequence
MALLNVLIYP DERLKTVAEP VSVFDEELQT FIDNMFETMY HEEGIGLAAT QVNVHKRIIT 
IDIEGTKENQ IVLINPEILE SFGETGIEEG CLSLPGLRGF VPRKETVKVK AQNRQGEDFM
LDADGLLAIC IQHEIDHLNG IVFADHLSPL KRQRMKEKLL KLQKQIAKNR