| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0029 |
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| Symbol | araC |
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| ID | 4239537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 30320 |
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| End bp | 31048 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638103560 |
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| Product | DNA-binding transcriptional regulator AraC |
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| Protein accession | YP_718235 |
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| Protein GI | 113460178 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.773429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGCAAT TAACTACTTT TGGTACAGGC ATTATTTTCG ATGGTAAACA TTCTTTTTCC
ACTCATCGAG GACAGCTGCT ACTATTCACA CCAAGTGCGG TTCAACATTA TCACAGACAT
CCAGAAAGTC AGTATTGGCA CTATAAATGG ATCTATTTTT TACCAAACCC AAAATGGAAT
AAATGGTTAA ATTGGTCAAA TATAGAGGAA AAAATAGGGC GTATTACCAT TGGTGATGAC
CGCTACTTTC AGGAAATCAG TCAGCTTTTC AGCAAAATTG AAGTCGAATT GAAATCAAGT
AAATTTTTTA AAGAAGATGT AGCCACCAGT CTATTAGAAT ACTTACTTAT GAAAAGTATT
TCTGCCGAGA AAATTGAAGT TATTCCAGTA ATTGATCAGC GTATTTTAAA TGTTTGTGAT
TTAATTTTGA CCAATTTGGC TAAAAATGAC AGCTTAGAAG CACTAGCAAA AAAAGTATTT
TTATCGCCAT CAAGATTATC TCACCTTTTT AAACAATCTT TGGGTATTGG CTTAGTGCAA
TGGAGAGAAG TACAGCGTAT TTCCGAAGCT AAAAAATTAC TTTATTTCTC TAACATTTCT
ATCTCAAATA TTGCTAAATC TTTAGGCTAT GAAGATTCTC TCTACTTTTC GAAAATTTTC
AAAAAACACA CCGCACTGTC TCCGTCTAAA TTTAGAACTT TAGAAAGATG TAAAAACAAT
GAAATGTGA
|
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| Protein sequence | MLQLTTFGTG IIFDGKHSFS THRGQLLLFT PSAVQHYHRH PESQYWHYKW IYFLPNPKWN
KWLNWSNIEE KIGRITIGDD RYFQEISQLF SKIEVELKSS KFFKEDVATS LLEYLLMKSI
SAEKIEVIPV IDQRILNVCD LILTNLAKND SLEALAKKVF LSPSRLSHLF KQSLGIGLVQ
WREVQRISEA KKLLYFSNIS ISNIAKSLGY EDSLYFSKIF KKHTALSPSK FRTLERCKNN
EM
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