Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0027 |
Symbol | |
ID | 4239535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 28020 |
End bp | 28763 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638103558 |
Product | LamB/YcsF family protein |
Protein accession | YP_718233 |
Protein GI | 113460176 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.529091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGA TTGATTTAAA TGTAGATCTT GCTGAGGGCT GTGCCAACGA CCAGCAACTT TTACAGCTTG TCAGTTCAGC AAATGTTTGC TGTGGATTAC ATGCGGGTGA TTACAACGAA ATACGCAAAG CGATTTTGTG GGCAAAAGAA AACGATGTAC GAATTGGAGC ACACCCTAGT TTTCCTGATC GTGAAAATTT TGGTAGAACC AATATGCAAT TGCCAGATGA TGAGCTTAAG GCTTGTTTAT TTTATCAACT TGGGGCAGTC AAAGCATTAT GTGATGCGTC CGGTGTGACG ATGGAATATG TAAAGCCTCA CGGAGCATTA TACAATATGG CAGCGAAAGA TCCTCATTTA GCTGCACTTA TTGCAGAAAC AGTGAAAAGT GTTGATCCTT CGCTTAAGTT AATGGGGCTT TCTGGCAGTA TCATGCTGAC TGTTGCTGAA CAGCACGGTC TAGCGACTAT CTCTGAGGTC TTTGCTGATC GACATTACCT TGCTGATGGT TCACTTGTGC CTCGTACTCG TGATGATGCA ATGGTTGAGA ACGATGAGGA GGCTATTTCT CAAGTGTTAC AAATGGTGCT TGAAGGTACT GTTCCAACTG TTGATGGCGG TAATGTGGCA ATTAAAGCAG ACAGCATCTG TTTACATGGT GATGGTGAAC ATGCAGTCGT ATTTGCAAAG CGTATTCGCA GAGAGTTAAA GGAGAAAGGG ATTTTGGTTA CAAGTTCAAT TTAG
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Protein sequence | MKQIDLNVDL AEGCANDQQL LQLVSSANVC CGLHAGDYNE IRKAILWAKE NDVRIGAHPS FPDRENFGRT NMQLPDDELK ACLFYQLGAV KALCDASGVT MEYVKPHGAL YNMAAKDPHL AALIAETVKS VDPSLKLMGL SGSIMLTVAE QHGLATISEV FADRHYLADG SLVPRTRDDA MVENDEEAIS QVLQMVLEGT VPTVDGGNVA IKADSICLHG DGEHAVVFAK RIRRELKEKG ILVTSSI
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