Gene HS_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0027 
Symbol 
ID4239535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp28020 
End bp28763 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content42% 
IMG OID638103558 
ProductLamB/YcsF family protein 
Protein accessionYP_718233 
Protein GI113460176 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.529091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGA TTGATTTAAA TGTAGATCTT GCTGAGGGCT GTGCCAACGA CCAGCAACTT 
TTACAGCTTG TCAGTTCAGC AAATGTTTGC TGTGGATTAC ATGCGGGTGA TTACAACGAA
ATACGCAAAG CGATTTTGTG GGCAAAAGAA AACGATGTAC GAATTGGAGC ACACCCTAGT
TTTCCTGATC GTGAAAATTT TGGTAGAACC AATATGCAAT TGCCAGATGA TGAGCTTAAG
GCTTGTTTAT TTTATCAACT TGGGGCAGTC AAAGCATTAT GTGATGCGTC CGGTGTGACG
ATGGAATATG TAAAGCCTCA CGGAGCATTA TACAATATGG CAGCGAAAGA TCCTCATTTA
GCTGCACTTA TTGCAGAAAC AGTGAAAAGT GTTGATCCTT CGCTTAAGTT AATGGGGCTT
TCTGGCAGTA TCATGCTGAC TGTTGCTGAA CAGCACGGTC TAGCGACTAT CTCTGAGGTC
TTTGCTGATC GACATTACCT TGCTGATGGT TCACTTGTGC CTCGTACTCG TGATGATGCA
ATGGTTGAGA ACGATGAGGA GGCTATTTCT CAAGTGTTAC AAATGGTGCT TGAAGGTACT
GTTCCAACTG TTGATGGCGG TAATGTGGCA ATTAAAGCAG ACAGCATCTG TTTACATGGT
GATGGTGAAC ATGCAGTCGT ATTTGCAAAG CGTATTCGCA GAGAGTTAAA GGAGAAAGGG
ATTTTGGTTA CAAGTTCAAT TTAG
 
Protein sequence
MKQIDLNVDL AEGCANDQQL LQLVSSANVC CGLHAGDYNE IRKAILWAKE NDVRIGAHPS 
FPDRENFGRT NMQLPDDELK ACLFYQLGAV KALCDASGVT MEYVKPHGAL YNMAAKDPHL
AALIAETVKS VDPSLKLMGL SGSIMLTVAE QHGLATISEV FADRHYLADG SLVPRTRDDA
MVENDEEAIS QVLQMVLEGT VPTVDGGNVA IKADSICLHG DGEHAVVFAK RIRRELKEKG
ILVTSSI