Gene HS_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0024 
Symbol 
ID4239532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp24999 
End bp26273 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content36% 
IMG OID638103555 
Productpermease (transport protein) 
Protein accessionYP_718230 
Protein GI113460173 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1593] TRAP-type C4-dicarboxylate transport system, large permease component 
TIGRFAM ID[TIGR00786] TRAP transporter, DctM subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTAG GATTATTTTT AGGTAGTTTA TTCCTATTTT TATTTCTTGG TGTGCCAGTA 
GCGTTATCAA TGTTACTGAG TGCCAGTTTT ATGTTATGGC ATATGGATAT GTTTGATACT
CAATTAATTG CTGAAAACTT TGTAATGGGT ACTAATAACT TTCCCTTAAT GGCAATTCCA
TTTTTTATGC TGACTGGTGA AATTATGAAA TACGGCGGTA TTTCTGAGCG GATTATCAAT
TTTGCTATGA GTATGGTAGG ACATATTAAA GGAGGATTAG GTTATGTAGT GATTATTTCA
GGTTTAATCT TTGCTGGGTT ATCTGGTTCT GCTGTAGCAG ACACCGCAGC GTTAGGGGCA
ATTTTAATTC CAATGATGGT AGCTAAAAAA TATGATGTTG CTCGTTCTAC AGGTTTAGTC
TGTGCGGCAG GAATTATTTC GGTGGTCATT CCTCCAAGTA TTCCAATGAT TGTATATGGA
ATTACCGCAG GTGCATCCAT TACCAAATTA TTTATGGGTG GCACGGTTCC TGGATTATTA
ATGGTTACAG GATTGTGGTT AATGTGGAAA TTTTTATATC GTAATCACGA AGAAAATATA
AAACCGAAAC AATCTGGTGC AGAACGCTGG CAAGCTTTTA AAAAAGCTTT TTTCCCATTA
TTGTTACCGG TCATTATCAT TGTTGGGTTG CGTGGCGGTA TTTTTACTCC AACAGAAGCA
GGTGTAGTTG CGGCGATTTA TGCGGGATTG GTTAGTCTTG GCTATCGCAG TTTAAATAAA
GAAAATTTAA TCGAAGTCTT TTTAAATACG ATTAAAACTA CTTCAATGGT GATGTTTGTT
GCGGCTGCGG CAATGATTTC TGCATTTGCA ATTACTGTTG CTCAAATTCC AACGGAGTTG
GTGCAATTTA TCAAAGGATT AACTGACAAT TCAACGGTAT TAATGTTGGT TATTATGATT
TTCTTATTAC TCGTTGGTTG TGTAATGGAT TTAATTCCTG CAGTATTAAT TTTTGTACCC
GTATTATTGC CGGTATTGAG AGCTTACAAT ATCGATATTG CTTATTTTGG CATTATGATG
GTGATTAACT TATCGATTGG CTTAATCACA CCTCCAGTGG GAACGGTACT TTATGTTGGT
TCGGGAATTG CTAAACTTGG CATAAGTAAA ATTAGTAAGG GAATTTCGCC GTTTTTGTTA
GTTTATGTTG CTATTTTAAT GTTGATGGTG TTCTTTCCTG ATGTTGTGAT TGTGCCAATG
AATTGGTTAT CTTAG
 
Protein sequence
MMLGLFLGSL FLFLFLGVPV ALSMLLSASF MLWHMDMFDT QLIAENFVMG TNNFPLMAIP 
FFMLTGEIMK YGGISERIIN FAMSMVGHIK GGLGYVVIIS GLIFAGLSGS AVADTAALGA
ILIPMMVAKK YDVARSTGLV CAAGIISVVI PPSIPMIVYG ITAGASITKL FMGGTVPGLL
MVTGLWLMWK FLYRNHEENI KPKQSGAERW QAFKKAFFPL LLPVIIIVGL RGGIFTPTEA
GVVAAIYAGL VSLGYRSLNK ENLIEVFLNT IKTTSMVMFV AAAAMISAFA ITVAQIPTEL
VQFIKGLTDN STVLMLVIMI FLLLVGCVMD LIPAVLIFVP VLLPVLRAYN IDIAYFGIMM
VINLSIGLIT PPVGTVLYVG SGIAKLGISK ISKGISPFLL VYVAILMLMV FFPDVVIVPM
NWLS