Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0024 |
Symbol | |
ID | 4239532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 24999 |
End bp | 26273 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638103555 |
Product | permease (transport protein) |
Protein accession | YP_718230 |
Protein GI | 113460173 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTTAG GATTATTTTT AGGTAGTTTA TTCCTATTTT TATTTCTTGG TGTGCCAGTA GCGTTATCAA TGTTACTGAG TGCCAGTTTT ATGTTATGGC ATATGGATAT GTTTGATACT CAATTAATTG CTGAAAACTT TGTAATGGGT ACTAATAACT TTCCCTTAAT GGCAATTCCA TTTTTTATGC TGACTGGTGA AATTATGAAA TACGGCGGTA TTTCTGAGCG GATTATCAAT TTTGCTATGA GTATGGTAGG ACATATTAAA GGAGGATTAG GTTATGTAGT GATTATTTCA GGTTTAATCT TTGCTGGGTT ATCTGGTTCT GCTGTAGCAG ACACCGCAGC GTTAGGGGCA ATTTTAATTC CAATGATGGT AGCTAAAAAA TATGATGTTG CTCGTTCTAC AGGTTTAGTC TGTGCGGCAG GAATTATTTC GGTGGTCATT CCTCCAAGTA TTCCAATGAT TGTATATGGA ATTACCGCAG GTGCATCCAT TACCAAATTA TTTATGGGTG GCACGGTTCC TGGATTATTA ATGGTTACAG GATTGTGGTT AATGTGGAAA TTTTTATATC GTAATCACGA AGAAAATATA AAACCGAAAC AATCTGGTGC AGAACGCTGG CAAGCTTTTA AAAAAGCTTT TTTCCCATTA TTGTTACCGG TCATTATCAT TGTTGGGTTG CGTGGCGGTA TTTTTACTCC AACAGAAGCA GGTGTAGTTG CGGCGATTTA TGCGGGATTG GTTAGTCTTG GCTATCGCAG TTTAAATAAA GAAAATTTAA TCGAAGTCTT TTTAAATACG ATTAAAACTA CTTCAATGGT GATGTTTGTT GCGGCTGCGG CAATGATTTC TGCATTTGCA ATTACTGTTG CTCAAATTCC AACGGAGTTG GTGCAATTTA TCAAAGGATT AACTGACAAT TCAACGGTAT TAATGTTGGT TATTATGATT TTCTTATTAC TCGTTGGTTG TGTAATGGAT TTAATTCCTG CAGTATTAAT TTTTGTACCC GTATTATTGC CGGTATTGAG AGCTTACAAT ATCGATATTG CTTATTTTGG CATTATGATG GTGATTAACT TATCGATTGG CTTAATCACA CCTCCAGTGG GAACGGTACT TTATGTTGGT TCGGGAATTG CTAAACTTGG CATAAGTAAA ATTAGTAAGG GAATTTCGCC GTTTTTGTTA GTTTATGTTG CTATTTTAAT GTTGATGGTG TTCTTTCCTG ATGTTGTGAT TGTGCCAATG AATTGGTTAT CTTAG
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Protein sequence | MMLGLFLGSL FLFLFLGVPV ALSMLLSASF MLWHMDMFDT QLIAENFVMG TNNFPLMAIP FFMLTGEIMK YGGISERIIN FAMSMVGHIK GGLGYVVIIS GLIFAGLSGS AVADTAALGA ILIPMMVAKK YDVARSTGLV CAAGIISVVI PPSIPMIVYG ITAGASITKL FMGGTVPGLL MVTGLWLMWK FLYRNHEENI KPKQSGAERW QAFKKAFFPL LLPVIIIVGL RGGIFTPTEA GVVAAIYAGL VSLGYRSLNK ENLIEVFLNT IKTTSMVMFV AAAAMISAFA ITVAQIPTEL VQFIKGLTDN STVLMLVIMI FLLLVGCVMD LIPAVLIFVP VLLPVLRAYN IDIAYFGIMM VINLSIGLIT PPVGTVLYVG SGIAKLGISK ISKGISPFLL VYVAILMLMV FFPDVVIVPM NWLS
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