Gene HS_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0023 
Symbol 
ID4239531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand+ 
Start bp24523 
End bp25002 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content34% 
IMG OID638103554 
Productpermease (transport protein) 
Protein accessionYP_718229 
Protein GI113460172 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.352968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTT CTACCGCACT TGACCGCACT TTAAAGATGT TGGCAGTGAT TGCATTAGTG 
ACAATGATTT TATTGGTCTT TTTTAATGCC ATGCTACGTT ATTTTTTCGA TTCAGGTATT 
GCTTGGTCGG AAGAATTTGC TCGAATTTGT TTCGTCTATA TGATTTTTTT AGGCATTATC 
TTAGTTGCCA AAGAAAGAGG GCATTTGACT GTTGATATTG TGATTTCTTA TTTACCTGCA 
TACGTACAGA TGTATACCTT ATTTTTTGCT GATATATTAG TGTTGCTTGC CTTATCTTTT 
ATTACTTATG GTGCATATCA ATTAATGTTG CTGACTTATA CACAAAAAAT GCCCGCAACG 
GAAATTTCTA CCGCATTTTT ATATTTAGCA GCTGTGATTT CTTCCTTATC TTATTTTCTC 
GTGGTTTTTA CCAATTTATG GAAACATTTA AAACTGGCAT TTAGAGGAGG GAAAGCATGA
 
Protein sequence
MKFSTALDRT LKMLAVIALV TMILLVFFNA MLRYFFDSGI AWSEEFARIC FVYMIFLGII 
LVAKERGHLT VDIVISYLPA YVQMYTLFFA DILVLLALSF ITYGAYQLML LTYTQKMPAT 
EISTAFLYLA AVISSLSYFL VVFTNLWKHL KLAFRGGKA