| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0019 |
|---|
| Symbol | |
|---|
| ID | 4239527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 20037 |
|---|
| End bp | 21212 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638103550 |
|---|
| Product | major facilitator superfamily permease |
|---|
| Protein accession | YP_718225 |
|---|
| Protein GI | 113460168 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.284837 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACACT ATGAAAAAAT CATCACTAGC TGTGTATCTA CCTCTGCAAC CCGTATGCTG
ATTGGGGCGG TCTCCACAAT TTATATGCTT GTATCAGGCA TTAATTTATA TGAAGTTGGG
TTAATTAAAA GCACTCAGGC TATTTTGATT TTTGTGCTGG GATTTGCAGT CGGCATTCTG
TCAGACCGAA TAGAACGGAA ATGGCTACAC ATCACCGCCT TAATTTTTTC GACTTTTTGG
CTCTATTTTT TCTACCTTGC GGGTTTATAC AAGAGCTTTA ACCTCTTTTT ATTAGCAGAA
ATCCTCAATG CGATTTCTCT CTGTGTTTAT CAAAACAATA CCAATGCTTA TTTAGTAGAT
CAGTTTTATC ACGAGCAACC GAAAGGTGAA CTCAGTCTTG CCTTAGGAAA ATTAGGAAAA
TGGGAGTTTT CCTTGATGGC ATTTTCTGCT TTATTAGGAG GGGTCTTATA CTCTACGCTA
TCAGAGAACC TCTTTTTATT AACAACGATT ATTATGTCGA CCGTTACAGT CGCTTCCTTT
ATTTTGCTTC CCAAGGTGAG CAGGAGAGCT ACACATAAGA CTCTACCATT TATTCAAAAG
CAGGACTTTT TAATTCTTAT ACGTAAATTC AGTCGCTACA AACAAGCTAT TTTCTTATTT
GTGGTGCTAA GCCTCTATTT TCAAATTATC ATTCAATATT GGCAAGCAGT TGTTTACGCC
ATAAACAAAT CAGAGCAGAA TGGACTTATT CTAGGAGGGA TGCTATTTTC GATGTTTATG
GTGCAATCTT GGGCAGGAAA AGCGATTGAG GTAAAATATC CATTCAGTCG CTTAACCCTT
GCCTTAAGCT TTCTCAGTAG TATGGTGTTA TCCTTTTTTG CAGAACGGTG GCAATCGGTC
TTCTTTTACA CAATCGCCAT TTGCTTAGCA TTATTTGTGG TACGATATAC AGTGATTCAA
ACCGACACAG AGCTACATAG ACATTTACTC TCTCGCTTTA GAGCAAAATA CGATATGCTA
CTCAACTCAT TAGTGAGAAT TTTAACCGCT GTAGTCTTAC TGATCATTGG TTATATAAGC
AATCTTTATG GTATACAAGC CATTCAAATC ATTGGATTAA TAATTGCTAT CATATTTACC
CTTTTTGCAT TAATAACTTC ACAAAATGTA AAATAG
|
|---|
| Protein sequence | MRHYEKIITS CVSTSATRML IGAVSTIYML VSGINLYEVG LIKSTQAILI FVLGFAVGIL
SDRIERKWLH ITALIFSTFW LYFFYLAGLY KSFNLFLLAE ILNAISLCVY QNNTNAYLVD
QFYHEQPKGE LSLALGKLGK WEFSLMAFSA LLGGVLYSTL SENLFLLTTI IMSTVTVASF
ILLPKVSRRA THKTLPFIQK QDFLILIRKF SRYKQAIFLF VVLSLYFQII IQYWQAVVYA
INKSEQNGLI LGGMLFSMFM VQSWAGKAIE VKYPFSRLTL ALSFLSSMVL SFFAERWQSV
FFYTIAICLA LFVVRYTVIQ TDTELHRHLL SRFRAKYDML LNSLVRILTA VVLLIIGYIS
NLYGIQAIQI IGLIIAIIFT LFALITSQNV K
|
|---|
| |