Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0013 |
Symbol | |
ID | 4239520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 13187 |
End bp | 14428 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638103543 |
Product | secretion system component |
Protein accession | YP_718218 |
Protein GI | 113460162 |
COG category | [S] Function unknown |
COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAGGTG TCATAGCAGA TGATTTTACC GGTGCAAGCG ATATTGCGAG TTTTTTAGTC GAAAATGGCT TAAAAACAGT GCAGATGAAC GGTATACCAA AAACCGCACT TAATAGCAAA GTTGATGCAA TTGTAATTAG CTTGAAATCA CGTTCCAATC CTGTTGAGGA AGCTATCCAA CAATCGTTAC AAGCATTAGA TTGGCTAAAA CAAAATGGCT GTACCCAATT CTATTTCAAA TATTGCTCAA CTTTCGATAG TACTGAAAAA GGCAATATCG GACCGGTAAC GGATGCGTTA ATGGCTGCAT TAGAAACTGA TTTTACTGTC ATTACCCCCG CACTTCCTGT TAATGGGAGA ACTATCTTTA ATGGTTATTT GTTTGTTGGT GATGTATTGC TGAATGAATC CGGTATGCGT AATCATCCGA TTACACCGAT GAAAGAGGCT AATTTAGTTC GCTTAATGGA CGCACAGTCT CAAGGTAAAA CTGGGTTATT GACTTATGCA GATGTTATTC AAGGTGCAGA GCGTGTGAAA GTACGTTTTA CAGAATTAAA ACAACAGGGC TATAAATATG CAGTAGTGGA TGCGGTAGAT AATTCACAGC TTGCGGTACT TGCTGAAGCC GTGGCGGATT TTAAATTGGT TACCGGCGGC TCAGGTTTGG GAGCTTACAT AGCAGCGTAT CGCTCAGGCG GTCAGAAAGG AACGAATGCC TTTGTACCGA ATAAAGGCAA AACAGTTGTG CTTTCAGGAT CCTGTTCTGT GATGACAAAC AGCCAAGTCA ATGCGTATAA AGCCCAAGCA CCAAGTTATT TCTTGCAAGC CGAGCAAGCC ATTAACAATC CAAATTATGT GGAAGAACTT TATGCGTGGG TTGTTGAAAA TCTAAACGGC AACTTTGCAC CGATGGTTTA TGCCACTGTA CCGCCTGAAA AATTGAAAGA AATCCAACAC CAGTTTGGTG GGGATAAAGC AAGCCATGCG ATTGAAACTA CATTTGCAAA ACTTGCAAAA AAATTGAAAG TTGCAGGGGT AACTAACTTC ATCACTGCAG GCGGCGAAAC ATCGAGCATT GTAGTCCAGG AGCTTGCTTT CTCTGGTTTT CACATCGGCA AGCAAATTGC ACCCGGTGTG CCATGGCTAC AAGCAGTCGA AGAGCCGATT TTTCTTGCCT TAAAATCTGG TAACTTCGGT AAAGAGAATT TCTTTAGTTT TGCACAAGGA ATGTGTGTAT GA
|
Protein sequence | MLGVIADDFT GASDIASFLV ENGLKTVQMN GIPKTALNSK VDAIVISLKS RSNPVEEAIQ QSLQALDWLK QNGCTQFYFK YCSTFDSTEK GNIGPVTDAL MAALETDFTV ITPALPVNGR TIFNGYLFVG DVLLNESGMR NHPITPMKEA NLVRLMDAQS QGKTGLLTYA DVIQGAERVK VRFTELKQQG YKYAVVDAVD NSQLAVLAEA VADFKLVTGG SGLGAYIAAY RSGGQKGTNA FVPNKGKTVV LSGSCSVMTN SQVNAYKAQA PSYFLQAEQA INNPNYVEEL YAWVVENLNG NFAPMVYATV PPEKLKEIQH QFGGDKASHA IETTFAKLAK KLKVAGVTNF ITAGGETSSI VVQELAFSGF HIGKQIAPGV PWLQAVEEPI FLALKSGNFG KENFFSFAQG MCV
|
| |