Gene HS_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0013 
Symbol 
ID4239520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp13187 
End bp14428 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content42% 
IMG OID638103543 
Productsecretion system component 
Protein accessionYP_718218 
Protein GI113460162 
COG category[S] Function unknown 
COG ID[COG3395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGGTG TCATAGCAGA TGATTTTACC GGTGCAAGCG ATATTGCGAG TTTTTTAGTC 
GAAAATGGCT TAAAAACAGT GCAGATGAAC GGTATACCAA AAACCGCACT TAATAGCAAA
GTTGATGCAA TTGTAATTAG CTTGAAATCA CGTTCCAATC CTGTTGAGGA AGCTATCCAA
CAATCGTTAC AAGCATTAGA TTGGCTAAAA CAAAATGGCT GTACCCAATT CTATTTCAAA
TATTGCTCAA CTTTCGATAG TACTGAAAAA GGCAATATCG GACCGGTAAC GGATGCGTTA
ATGGCTGCAT TAGAAACTGA TTTTACTGTC ATTACCCCCG CACTTCCTGT TAATGGGAGA
ACTATCTTTA ATGGTTATTT GTTTGTTGGT GATGTATTGC TGAATGAATC CGGTATGCGT
AATCATCCGA TTACACCGAT GAAAGAGGCT AATTTAGTTC GCTTAATGGA CGCACAGTCT
CAAGGTAAAA CTGGGTTATT GACTTATGCA GATGTTATTC AAGGTGCAGA GCGTGTGAAA
GTACGTTTTA CAGAATTAAA ACAACAGGGC TATAAATATG CAGTAGTGGA TGCGGTAGAT
AATTCACAGC TTGCGGTACT TGCTGAAGCC GTGGCGGATT TTAAATTGGT TACCGGCGGC
TCAGGTTTGG GAGCTTACAT AGCAGCGTAT CGCTCAGGCG GTCAGAAAGG AACGAATGCC
TTTGTACCGA ATAAAGGCAA AACAGTTGTG CTTTCAGGAT CCTGTTCTGT GATGACAAAC
AGCCAAGTCA ATGCGTATAA AGCCCAAGCA CCAAGTTATT TCTTGCAAGC CGAGCAAGCC
ATTAACAATC CAAATTATGT GGAAGAACTT TATGCGTGGG TTGTTGAAAA TCTAAACGGC
AACTTTGCAC CGATGGTTTA TGCCACTGTA CCGCCTGAAA AATTGAAAGA AATCCAACAC
CAGTTTGGTG GGGATAAAGC AAGCCATGCG ATTGAAACTA CATTTGCAAA ACTTGCAAAA
AAATTGAAAG TTGCAGGGGT AACTAACTTC ATCACTGCAG GCGGCGAAAC ATCGAGCATT
GTAGTCCAGG AGCTTGCTTT CTCTGGTTTT CACATCGGCA AGCAAATTGC ACCCGGTGTG
CCATGGCTAC AAGCAGTCGA AGAGCCGATT TTTCTTGCCT TAAAATCTGG TAACTTCGGT
AAAGAGAATT TCTTTAGTTT TGCACAAGGA ATGTGTGTAT GA
 
Protein sequence
MLGVIADDFT GASDIASFLV ENGLKTVQMN GIPKTALNSK VDAIVISLKS RSNPVEEAIQ 
QSLQALDWLK QNGCTQFYFK YCSTFDSTEK GNIGPVTDAL MAALETDFTV ITPALPVNGR
TIFNGYLFVG DVLLNESGMR NHPITPMKEA NLVRLMDAQS QGKTGLLTYA DVIQGAERVK
VRFTELKQQG YKYAVVDAVD NSQLAVLAEA VADFKLVTGG SGLGAYIAAY RSGGQKGTNA
FVPNKGKTVV LSGSCSVMTN SQVNAYKAQA PSYFLQAEQA INNPNYVEEL YAWVVENLNG
NFAPMVYATV PPEKLKEIQH QFGGDKASHA IETTFAKLAK KLKVAGVTNF ITAGGETSSI
VVQELAFSGF HIGKQIAPGV PWLQAVEEPI FLALKSGNFG KENFFSFAQG MCV