| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0006 |
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| Symbol | aroE |
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| ID | 4239513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 8310 |
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| End bp | 9125 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638103536 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_718211 |
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| Protein GI | 113460155 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAT ACGCAGTTTG GGGGAATCCC ATTGCTCAAA GTAGATCTCC TCAACTTCAT
CGATATTTTG CGAAGCAGAC TCGACAAAAC TTAGATTATG TAGCGATATT GGGTGATGAA
GAAAAATTTG AACAACAGTT GAGCGATTTT TTTGCACAAG GTGCTAAAGG CTGCAATATT
ACCGCTCCTT TCAAAGAGCG AGCATTTAAA TTGGCACAAC AACATAGCAA GCGTTGTTTA
AGTGCGGAGT CTTGTAACAC CTTAAAAAAA TTAGCTGATG GAACATTATT TGCTGATAAT
ACGGATGGTG CCGGTTTAGT GAGCGATTTA CAACGTTTAA ATTGGCTCAA ACCAAACCAA
AGAATACTGA TTTTAGGCGC AGGCGGTGCC ACAAAAGGAG TTTTATTGCC TTTATTACAA
GCTCAACAAA ATATCTTAAT TACCAACCGC ACTTTTAGTA GAGCTGAAGA CTTAGCACAT
AAATTCAATC ATTTTGGCAC CATTGAAGCG TTGGATCTGG AACATATTCC GATACAAACA
TTTGATTTAA TCATCAATGC TACATCAACA GGATTACAAG GTAAAACTAT TGATATTGAT
CCTCAGATTT TACAACTTGC CTCTGCCGTT TATGATATGC AATACAGCAA AGAAAGCGAC
ACGCCTTTTA TTGCATTGTG TAAAAAACAA GGGGTAACCA AAATTAGCGA TGGCTTCGGT
ATGCTGGTTG GGCAAGCTGC TCACGCATTT TATTTATGGC GTGGCGTAAT GCCGGAAATT
GACCCTTTAT TTAGTGGAAA CGAGATAAAA ATATAA
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| Protein sequence | MDKYAVWGNP IAQSRSPQLH RYFAKQTRQN LDYVAILGDE EKFEQQLSDF FAQGAKGCNI
TAPFKERAFK LAQQHSKRCL SAESCNTLKK LADGTLFADN TDGAGLVSDL QRLNWLKPNQ
RILILGAGGA TKGVLLPLLQ AQQNILITNR TFSRAEDLAH KFNHFGTIEA LDLEHIPIQT
FDLIINATST GLQGKTIDID PQILQLASAV YDMQYSKESD TPFIALCKKQ GVTKISDGFG
MLVGQAAHAF YLWRGVMPEI DPLFSGNEIK I
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