| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_C0051 |
|---|
| Symbol | |
|---|
| ID | 4206663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008265 |
|---|
| Strand | - |
|---|
| Start bp | 34003 |
|---|
| End bp | 34782 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | |
|---|
| Product | putative modification methylase dpniia |
|---|
| Protein accession | YP_699979 |
|---|
| Protein GI | 110804053 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 59 |
|---|
| Plasmid unclonability p-value | 0.0481115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAG ATAAAAACAG TAAAATGATG AAACCACCAA TAACAAGAAT GGGAGGAAAA
AGTAAGTTAA GAAAAACAAT AATAGAAATG ATACCAGACC ATGTGTGTTA TGTAGAACCA
TTCTTTGGAG CTGGGTGGGT TTTCTTTGGA AAAACTCCTT CAAAGGTTGA GGTGATTAAT
GATGTAGATA AAGAACTCAT TAATTTATTT AAAATGATTA AATACCATGC TCCTGAAATT
GAAAGAATGT TAGAGTATGA ATTTTCAGGA AGAGATATAT TTGAAGAATA TAAAAATGTT
ACTTTAGAAC ATTTAACAGA AATACAAAGA GCTGTTAGAT TTTTATATCT AATTTCTCAA
AGTTTTGCGG GAAAGGGTAA TCATTATGGG TATGGAACTA ATACCAAGCC TTCTCCACAG
ATTTTTTATA AAAGAGTATT AGGAGATATA AAAAATAGAC TTAGAAACAC TTATGTAGAA
AATTTATCCT TTGAAAAAAT TATAGAAAAA TATGATAGAG AATATAGTTT TTTCTTTTGT
GATCCACCAT ATTTTGAAAC AGCAGGGTAT GGAACAGAGT TTGGCGAAAA AGAGCATTTA
CTGTTAAGAG ATAAATTAAA AAATATAAAA GGAAAGTTCT TAGTAACTAT AAATGACCAT
CCAAAAGTAA GAGAATGGTA TAAAGATTTT AATATTAAAG AAGTAAAAGT AATGTACTCC
GTATCTAATC AAGCAAGTGC AAGAAAAGAA TATGGGGAAT TGATAATAAC AAATTTTTAA
|
|---|
| Protein sequence | MTKDKNSKMM KPPITRMGGK SKLRKTIIEM IPDHVCYVEP FFGAGWVFFG KTPSKVEVIN
DVDKELINLF KMIKYHAPEI ERMLEYEFSG RDIFEEYKNV TLEHLTEIQR AVRFLYLISQ
SFAGKGNHYG YGTNTKPSPQ IFYKRVLGDI KNRLRNTYVE NLSFEKIIEK YDREYSFFFC
DPPYFETAGY GTEFGEKEHL LLRDKLKNIK GKFLVTINDH PKVREWYKDF NIKEVKVMYS
VSNQASARKE YGELIITNF
|
|---|
| |