Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_C0041 |
Symbol | |
ID | 4206670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008265 |
Strand | + |
Start bp | 29010 |
End bp | 29855 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | |
Product | putative ATPase |
Protein accession | YP_699969 |
Protein GI | 110804060 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.0000000217045 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATTAG CAGTTGATTT AGGAAATTAT AATATTAAGA CTTCTGAAAA CATATTATTC GAAAGTAGAT ATGAAGAAGT TGAGAAAGAA GATTTTGATA CAGATCTATT AGAATTTGAT AATAAATCTT TTAGAATGGA ATCAGGGGAC TTTGAAAATG AATTTAATAA AGCTAAAAAA CAATACATTC CCAATTTACT TTATGCTATA GCAAAGTCTT GTGATAAAAA TAAAGTAGAA ATTGATTTAG TTTTAGGAGT TCCAGCTTCT AATTTAGGAA TTAGTGAAAA TTTTAAAACT GAATTATCTG ATAGAGAATT TAAATTTACT CTCTTTGGAA CTAAGAAGGT AGTAAAAATT AATAAAGTTG CTACAGTTGC AGAAGGATTA AGTTCATTCT ACACATTACC AAAAGAAGAA AGATTAAAGG ATATAGTGTT ATTAGATATT GGCGGTAGAA CAATTAACGT TTGTACATTT ACTGGTGGAA AATGTTCATT AAAGTTTACT GTTCCTGGTG GAATGTTAGA TTTATATAGT CAAATACAAG AAGATTATAA TAAAGTTGGT AATAATGCAG ATGTAGAAGA AATAATAAGA TTAATTAAAA ATGATACAAT AGATGCTTCT AATGCAAAAG AGAGATTTGT TAAATCACAA TTAAATAAAA TAAGATTACA AGTTCCTAAT TTTTCTACTT ATAAAGTTTA TCTAGTTGGG GGCGGTAGCT TAGAATTACA AGAAGCTCTT AGAAATCAAC TTGAAAATAT AAACTTTGTT CCAGATACAG TTTTTAGTAA TGCTAAAGGA AATAAGCTTA TAGCAAAAGC TAAATGGGGA GAATAA
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Protein sequence | MILAVDLGNY NIKTSENILF ESRYEEVEKE DFDTDLLEFD NKSFRMESGD FENEFNKAKK QYIPNLLYAI AKSCDKNKVE IDLVLGVPAS NLGISENFKT ELSDREFKFT LFGTKKVVKI NKVATVAEGL SSFYTLPKEE RLKDIVLLDI GGRTINVCTF TGGKCSLKFT VPGGMLDLYS QIQEDYNKVG NNADVEEIIR LIKNDTIDAS NAKERFVKSQ LNKIRLQVPN FSTYKVYLVG GGSLELQEAL RNQLENINFV PDTVFSNAKG NKLIAKAKWG E
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