Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_C0040 |
Symbol | |
ID | 4206693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008265 |
Strand | - |
Start bp | 27748 |
End bp | 28572 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_699968 |
Protein GI | 110804037 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.000000176909 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCTT ACTATTTTAT GACAGAAGAA CAATGGGAAA AAGAAAAAAC ATATAATCTT ACAGATGACC AATTCTTAAT TTTAAATCAA ATCGAATACA AAGAATCCAA GAGAAAGGCT GAAAGTTTAT TAAGATTTTT AAAAAAGAGT ATTATGCTTG GTGATGGCTC TTGGACTATC TCTTTTACAA AATTCCATAA ATTTTATAAT GATTGGGTAA ATAAACATAA AAAGAAAAGA CCTAGCCTAA AAAATATAAG TTTAACTCAA CTTAAATTTA CAGTTAATAG ACTTAAAGAT TTAGGTTTAT TAATTATCGA AAAAAATAAA AAAACTAATA TCTATAAATT ACCAGCGACC GAAAAACCGA CCAATAATGA AAACATTACA GAAGGCATTA ATACTAGCTT AGAAGCAAAT TCAAGCGTTC CTATGATTTC AGGTAGTTCT TATATAGATA TAGATATATA TAGTAAAACT GAGAAAAATG AAAATAAAGA ATTTGAAGCA GATAAGTATG AAAAATGTAC AAGCTTAGTA GATGCTAGAA GAAAAGCTAA AGAACTATTT AATAAATTTA ATGTTAAAAA TAATTGGATT AAAAATAGGG TTTTAGTAAC AATAAGCTAT GTTTATAAAA ATGTTACTGT TAGATTTTTA GAAAGCTATA TATCAAAACT TATTAGAAAC GCTAGAGAAG AATACAAAAA GAACTGGATT AAATATACTA ACATTAAAGT AAAACAAGTT AAAGAAGCTA ATTTTACACA AAGAGAAGAC TACAATTGGA AAGAGCTAGA ACAAAAATTA TTAGGTTGGA ACTAA
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Protein sequence | MAAYYFMTEE QWEKEKTYNL TDDQFLILNQ IEYKESKRKA ESLLRFLKKS IMLGDGSWTI SFTKFHKFYN DWVNKHKKKR PSLKNISLTQ LKFTVNRLKD LGLLIIEKNK KTNIYKLPAT EKPTNNENIT EGINTSLEAN SSVPMISGSS YIDIDIYSKT EKNENKEFEA DKYEKCTSLV DARRKAKELF NKFNVKNNWI KNRVLVTISY VYKNVTVRFL ESYISKLIRN AREEYKKNWI KYTNIKVKQV KEANFTQRED YNWKELEQKL LGWN
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