Gene CPR_C0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_C0040 
Symbol 
ID4206693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008265 
Strand
Start bp27748 
End bp28572 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content25% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_699968 
Protein GI110804037 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.000000176909 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCTT ACTATTTTAT GACAGAAGAA CAATGGGAAA AAGAAAAAAC ATATAATCTT 
ACAGATGACC AATTCTTAAT TTTAAATCAA ATCGAATACA AAGAATCCAA GAGAAAGGCT
GAAAGTTTAT TAAGATTTTT AAAAAAGAGT ATTATGCTTG GTGATGGCTC TTGGACTATC
TCTTTTACAA AATTCCATAA ATTTTATAAT GATTGGGTAA ATAAACATAA AAAGAAAAGA
CCTAGCCTAA AAAATATAAG TTTAACTCAA CTTAAATTTA CAGTTAATAG ACTTAAAGAT
TTAGGTTTAT TAATTATCGA AAAAAATAAA AAAACTAATA TCTATAAATT ACCAGCGACC
GAAAAACCGA CCAATAATGA AAACATTACA GAAGGCATTA ATACTAGCTT AGAAGCAAAT
TCAAGCGTTC CTATGATTTC AGGTAGTTCT TATATAGATA TAGATATATA TAGTAAAACT
GAGAAAAATG AAAATAAAGA ATTTGAAGCA GATAAGTATG AAAAATGTAC AAGCTTAGTA
GATGCTAGAA GAAAAGCTAA AGAACTATTT AATAAATTTA ATGTTAAAAA TAATTGGATT
AAAAATAGGG TTTTAGTAAC AATAAGCTAT GTTTATAAAA ATGTTACTGT TAGATTTTTA
GAAAGCTATA TATCAAAACT TATTAGAAAC GCTAGAGAAG AATACAAAAA GAACTGGATT
AAATATACTA ACATTAAAGT AAAACAAGTT AAAGAAGCTA ATTTTACACA AAGAGAAGAC
TACAATTGGA AAGAGCTAGA ACAAAAATTA TTAGGTTGGA ACTAA
 
Protein sequence
MAAYYFMTEE QWEKEKTYNL TDDQFLILNQ IEYKESKRKA ESLLRFLKKS IMLGDGSWTI 
SFTKFHKFYN DWVNKHKKKR PSLKNISLTQ LKFTVNRLKD LGLLIIEKNK KTNIYKLPAT
EKPTNNENIT EGINTSLEAN SSVPMISGSS YIDIDIYSKT EKNENKEFEA DKYEKCTSLV
DARRKAKELF NKFNVKNNWI KNRVLVTISY VYKNVTVRFL ESYISKLIRN AREEYKKNWI
KYTNIKVKQV KEANFTQRED YNWKELEQKL LGWN