Gene CPR_C0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_C0017 
Symbol 
ID4206660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008265 
Strand
Start bp18483 
End bp18917 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content30% 
IMG OID 
ProductHNH endonuclease domain protein 
Protein accessionYP_699946 
Protein GI110804050 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones95 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAGGA AATTTTGCAG ATGTGGAAAA ATAATTTCAC AAGAATTAAA AATGTGTCCA 
GAGTGTCAAG CAAAATATGA TAATAGAATA AAGACTGTAG ATAATAAAGA AGCTTATAAA
AGATATAAAG CTAACAGAAA AGATTTTAAA GAACAGAAGT TTTATTCTAG TAGAGAGTGG
ATATTCACTA GAGATGTTGT AAAGCAAAGA GATAATGGGA TTTGCAAATT GTGTGAGAGC
AAAGATAAAT TATCTTTTGT AGATAATGTA CATCATATTG AAGAGCTTAA AGACAACTGG
AGTAAACGAA CTAACATGGA CAATCTTATA TGCCTATGTG ACAGGTGCCA TTACTATGTA
CATAAGAAAT ATAAGAAAAG TATTGCTGAT AAAAAAGAGA TGCAAGAAAA GTTAAGGGAA
TTACTCAAGG GGTAG
 
Protein sequence
MLRKFCRCGK IISQELKMCP ECQAKYDNRI KTVDNKEAYK RYKANRKDFK EQKFYSSREW 
IFTRDVVKQR DNGICKLCES KDKLSFVDNV HHIEELKDNW SKRTNMDNLI CLCDRCHYYV
HKKYKKSIAD KKEMQEKLRE LLKG