| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_B0008 |
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| Symbol | |
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| ID | 4206648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008264 |
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| Strand | - |
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| Start bp | 7565 |
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| End bp | 8542 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642567240 |
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| Product | phage integrase family protein |
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| Protein accession | YP_699927 |
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| Protein GI | 110804018 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 127 |
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| Plasmid unclonability p-value | 0.000000174514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGAACA TAAGTAAATA TGAGGTTTTA GAATGGATTG GAGTTATTTT TATGAGTAAA
AAGAAAAATA GAAATATTAA CGGACAGATT ACATATGCCA TAAATAAATG TTTTAAAGAA
GGGATGGATA AAAGAGCGTA TAAGATTCAA GAAGGAAGAT CCATGGGTGA TAAAGTTTTT
AGTTATGCAG AAAAATACAG ACTTAAAGAT ATGGCGAAAT CTTTACAAAA ATTTTTAAAG
GACAATGGAA GAGATGTTAA GTATGTGAAG GATATACAAT CGGAAGATAT TCAAGGCTAC
TTAGAAAGTG CAAAGGCGAG AGGCTGCACA CAAAATACAA TAGATACATA TGCGAATAGC
TTATTTAAAA TTCAAGAGGC TATAAATGCC ACATATGGCG TTAAAACAAA TTGGAGGAGT
GAAATATCTA TTCCAGTAGC TGAAAAGGCT CAGAGTGGCG ATAGAGGAGC AAATAGTGTT
ATAACAAGAG ATGATTATAA TAAAATATTA GATTATGCAG AAAAAAATAT TAGTGAAAGC
GGATATGCTA TAAGATTACA GGACTTTTTA GGGGTTAGAG TTGAGGAAGT GGCTCGCATA
AGTAGAGATA ATATAAATTT AGAGGATAGA ACTATAAAAC TTGTAAATAC AAAAGGGGGA
AGAGAACTTA CAAGAGAAAT TCCAAATGAT AGAGTAGAGC TTGTTAAAGA AGTATTAGAA
CATAATTACC ACGAAGATAG ATTATTTAGT ATAAATGGAG ATTCTATAAA TAGATATTTA
AATAGAATAG AGGACAAGCT AGGAATAGAA AGGCACAGTA ACCATGATAT AAGGCGATTA
ATAGCTCAAG AAAAATTTGA TAGTTATAGA AAATCTGGTT TAAGTATCAA AGATGCAGCT
AATAAAACAA GTGCTTGGTT AAGTCATGGA GATAATAGAA ATGAGCTTCT TGAAAAGAGC
TATATAAAAC TAAAATAA
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| Protein sequence | MPNISKYEVL EWIGVIFMSK KKNRNINGQI TYAINKCFKE GMDKRAYKIQ EGRSMGDKVF
SYAEKYRLKD MAKSLQKFLK DNGRDVKYVK DIQSEDIQGY LESAKARGCT QNTIDTYANS
LFKIQEAINA TYGVKTNWRS EISIPVAEKA QSGDRGANSV ITRDDYNKIL DYAEKNISES
GYAIRLQDFL GVRVEEVARI SRDNINLEDR TIKLVNTKGG RELTREIPND RVELVKEVLE
HNYHEDRLFS INGDSINRYL NRIEDKLGIE RHSNHDIRRL IAQEKFDSYR KSGLSIKDAA
NKTSAWLSHG DNRNELLEKS YIKLK
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