| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2671 |
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| Symbol | oxaA |
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| ID | 4205159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2895101 |
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| End bp | 2895817 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642567219 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_699906 |
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| Protein GI | 110802031 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.372035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGTCAA TTTTAAAGCC GATAACTAAT TTATTCACAA TGATATTTCA AGCTATCCAC
GGCTTTGTTG CCTCACTAGA TATTTTTGGT GTAGGTGCTG GATACGTAAT AACTATTTTC
TTATTAACTT TATTAGTAAG ATTAATATTA TTACCGCTAA ATATAAAGCA AACTAGATCT
CAACAAAAGA TGCAAGAAAT ACAGCCAGAA ATAGCTAAAC TTCAGAAAAA ATATAAAAAT
AATCCTGAAA AAGCTCAACA AGAAATGATG AAGCTTTATA AGGAGAATAA TGTAAACCCA
ATGAGTGGTT GTTTACCTTT ATTAATCCAA ATGCCAATAT TATTTGCATT ATACTATGTA
TTCTATGGAT TAGGTGAGTT AAAAGGTGTA TCATTCTTAT GGTTAGGAGA TTTATGGGCT
CCAGATAGAA CATTCATATT ACCAATTTTA TCAGCTGCAA CAACATATTT ATCATCTTTA
TTAATGACAA AGTTTACTCA GTCACAAACT GGGGGAGCAC CTGGTGGAAT GAATATGAAT
ACTATGAATA TAGTAATGGC TGGTATGATG GGGGTAATGT CAATACAATT CCCATCAATG
CTTGTATTAT ACTGGGTAAT AGGTAACCTA ATTCAAATGG TTCAAACATA CTTCATAGTT
GTTTTACCTA GCAAAAAGAG AGCTAAGGAA AGAGAACAAT ATAAAGATAT TAAGTAA
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| Protein sequence | MQSILKPITN LFTMIFQAIH GFVASLDIFG VGAGYVITIF LLTLLVRLIL LPLNIKQTRS
QQKMQEIQPE IAKLQKKYKN NPEKAQQEMM KLYKENNVNP MSGCLPLLIQ MPILFALYYV
FYGLGELKGV SFLWLGDLWA PDRTFILPIL SAATTYLSSL LMTKFTQSQT GGAPGGMNMN
TMNIVMAGMM GVMSIQFPSM LVLYWVIGNL IQMVQTYFIV VLPSKKRAKE REQYKDIK
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