Gene CPR_2668 details

Gene Information

• Locus tag: CPR_2668
• Symbol: gidA
• ID: 4204856
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 2890595
• End bp: 2892487
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 642567216
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_699903
• Protein GI: 110802913
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGATATA ATGCAGGAAG TTATGATATA GTTGTTATAG GTGCTGGTCA TGCAGGTTGT 
GAGGCAGGAT TAGCGGCAGC TAGAATGGGA TGTAAAACTT TAGTTTGTAC ATTAACATTA 
GATTCAGTTG CTATGATGCC ATGTAATCCT AATATAGGTG GAACTGCTAA GGGACATCTA 
GTTAGAGAAA TAGATGCTTT AGGTGGAGAA ATGGGAGTAA ATATAGACCA TACATTTATC 
CAATCTAAAA TGTTAAATAC ATCAAAAGGA CCTGCTGTAC ACTCTCTAAG AGCACAAGCT 
GATAAAAAGA AATATCAAGA AAGAATGAAA AAGGTTTTAG AAACACAAGA AAATCTTCAT 
TTAAGACAAT TAGAAGTAGT TTCTGTAGAA GTTGAAGATG GAAAAGTTAA AGGTGTTCTA 
ACTAAAAATG GTGCATTTTT TGAGTGTAAA GCTGTTATAA TGACAAGTGG AACATACTTA 
CAAAGTAGAA TAATAATCGG AGATGTTAGT TATAGCCAGG GACCGAATGG ACTTAGCAAT 
GCTAATGAAC TTTCAAAATC ATTAATAGAT TTAGGAATTG ACCTTAGAAG ATTTAAAACT 
GGTACTCCAG CTAGAGTCAA TAAGAGAAGT GTTGATTTCT CAAAAATGAT AGAACAACCA 
GGAGATGAGG AAATAATACC ATTCTCATTT ATAAGTGGAA ATATAGATAG AGACCAAGTT 
TCATGTTGGT TAACATATAC TAATGAGGAA ACTCATAAGG TAATTCAAGA AAATATACAC 
AGATCACCTA TGTATAATGG AAGTATAAAA GGTGTTGGGC CAAGATATTG TCCATCAATA 
GAAGACAAGG TAATGAGATT CCAAGATAAA GATAGACATC AAATCTTTAT AGAACCAGAA 
GGTGATGATA CAGAAGAAAT GTATGTTGGA GGAATGTCAT CATCTCTTCC AGAAGATGTT 
CAAGTTCAAA TGATAAAAAC AGTTCCAGGT CTTGAAAATG CTGAGATTAT GAGAACTGCA 
TATGCAATAG AATATGATTG TATAGATCCA ACACAATTAA AGGCTTCACT AGAATTTAAA 
AATATTGATG GATTCTTTAG TGCTGGACAA ATTAATGGTA GCTCAGGATA TGAAGAAGCT 
GGAGCTCAAG GAATAGTAGC TGGTATAAAT GCAGCCTTAA AAGTTCAAGG AAAAGATCCT 
ATGATACTTA CAAGATCAGA TGGATATGTA GGAGTTTTAA TTGATGATTT AATTACTAAA 
GGTACTAATG AGCCTTATAG AATGATGACA TCAAGAGCTG AATATAGATT ATTATTAAGA 
CAAGATAATG CTGATTTCAG ATTAACTGAA ATTGGACACA ATGTTGGATT AGTTACAGAA 
GAAAGATGGA ATAAGTTTCA GGAAAGAAAG CAAAACTTAG AACGTGAGCT TGAGAGACTT 
AAGGAACTTC AAATAACTAA TAAAACAGAA AATAATGAGA AAATAGTTGA ATTAGGTTCA 
ACAGAGCTTA AAAAGCCAAT AAGAATGTAT GAACTTATAA AAAGACCAGA GTTAGACTAC 
TTCTCATTAG CATGTTTAGA CCCTGAAAGA CCTGATTTAC CAAAGGATAT TGGGGATCAA 
ATAAACATAA TTGCTAGATA CGAAGGATAC ATTCAAACTC AATTAGAACA AGTTGCTCAA 
TTTAAAAAGT TTGAGAAAAA AGTTCTTCCA GAGGATTTAG ATTACAATGA CGTAAATAGT 
TTAAGAATAG AAGCTATACA AAAGCTAAAT AAAATTAGAC CTTTAAATAT AGGTCAAGCT 
TCAAGAATAT CAGGGGTATC CCCAGCAGAT ATATCAGTTC TGTTAATATT CTTAGAGCAT 
TATAGAAAAA CTGGAAAAAA TACTGATAAC TAA 

 

Protein sequence

MRYNAGSYDI VVIGAGHAGC EAGLAAARMG CKTLVCTLTL DSVAMMPCNP NIGGTAKGHL 
VREIDALGGE MGVNIDHTFI QSKMLNTSKG PAVHSLRAQA DKKKYQERMK KVLETQENLH 
LRQLEVVSVE VEDGKVKGVL TKNGAFFECK AVIMTSGTYL QSRIIIGDVS YSQGPNGLSN 
ANELSKSLID LGIDLRRFKT GTPARVNKRS VDFSKMIEQP GDEEIIPFSF ISGNIDRDQV 
SCWLTYTNEE THKVIQENIH RSPMYNGSIK GVGPRYCPSI EDKVMRFQDK DRHQIFIEPE 
GDDTEEMYVG GMSSSLPEDV QVQMIKTVPG LENAEIMRTA YAIEYDCIDP TQLKASLEFK 
NIDGFFSAGQ INGSSGYEEA GAQGIVAGIN AALKVQGKDP MILTRSDGYV GVLIDDLITK 
GTNEPYRMMT SRAEYRLLLR QDNADFRLTE IGHNVGLVTE ERWNKFQERK QNLERELERL 
KELQITNKTE NNEKIVELGS TELKKPIRMY ELIKRPELDY FSLACLDPER PDLPKDIGDQ 
INIIARYEGY IQTQLEQVAQ FKKFEKKVLP EDLDYNDVNS LRIEAIQKLN KIRPLNIGQA 
SRISGVSPAD ISVLLIFLEH YRKTGKNTDN