Gene CPR_2660 details

Gene Information

• Locus tag: CPR_2660
• ID: 4205961
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 2883584
• End bp: 2884231
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 642567208
• Product: LysE family translocator
• Protein accession: YP_699895
• Protein GI: 110803944
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.094148
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTTTT TCTATTTAAA GGCTATTTTA TCTGGAATTG TAACAGGCCT ATTAGTTTCT 
ATACCATTAG GTCCAGCTGC AATAGAAGCT GCAACACAAT CTCTAGATAA AGGATTTAGA 
AAAGGCTTTG AAGTTTCATT AGGCGCAATA GCTGCTGACT ATTTGTACAT ATTATTAATA 
AACTTCGGAG TAGCCCAATT ATTAAATTTA AATAGGTATG TAGAATGTGC CTTTTGGATT 
ATTTCAGGAT TAGTTCTTAT AATAGTTAAT TTAATATTTA AATCTTCTCA AAAAAGTTTA 
GACGAAAAAT GTATTGAAAC TATAGATAGT CATAAAACTG GTAATGGTTT TATAAATGGT 
TTTTTAATAA CCTTTGTAAA CCCTATGACT TTATCAGTAT GGATGGCTGT AAGTGCTGGA 
ATAATGAGTA TATGGAAACT TTCAGGTAGA CATTTCTTTT TAGTAGCACT AAGTGCTATG 
TTTATAACAA CTTTAGCTTG GTTTATATTA TTAAATTTTA TGGCTGCCAA AGGTGGAAGT 
CTAGTAAAAA AAGAACTTAC TGGTAAAGCT GATAAAAGTG TAAAATATTT TATGATTTTA 
CTTGGATTAG GATTTACTAT ATACGGAATA TTTAAAATTT TCATGTGA 

 

Protein sequence

MSFFYLKAIL SGIVTGLLVS IPLGPAAIEA ATQSLDKGFR KGFEVSLGAI AADYLYILLI 
NFGVAQLLNL NRYVECAFWI ISGLVLIIVN LIFKSSQKSL DEKCIETIDS HKTGNGFING 
FLITFVNPMT LSVWMAVSAG IMSIWKLSGR HFFLVALSAM FITTLAWFIL LNFMAAKGGS 
LVKKELTGKA DKSVKYFMIL LGLGFTIYGI FKIFM