| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2654 |
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| Symbol | rpsR |
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| ID | 4204044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2880881 |
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| End bp | 2881123 |
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| Gene Length | 243 bp |
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| Protein Length | 80 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642567202 |
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| Product | 30S ribosomal protein S18 |
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| Protein accession | YP_699889 |
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| Protein GI | 110801451 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0238] Ribosomal protein S18 |
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| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000144955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAACG TAAAAAGAGG CGGAAAATTC AGAAGAGCAA GAAAAAAAGT TTGCATATTC
TGCGTTGATA AAGCTGAATC AATAGATTAC AAAGATGTAG CTAAATTAAA GAAATACATC
ACAGAAAGAG GTAAAATATT ACCAAGAAGA ATTTCTGGAA CTTGTGCTAA GCATCAAAGA
CAATTAACAG ATGCTATCAA GAGATCAAGA AATATCGCAT TATTACCATT CACAACTGAG
TAA
|
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| Protein sequence | MSNVKRGGKF RRARKKVCIF CVDKAESIDY KDVAKLKKYI TERGKILPRR ISGTCAKHQR
QLTDAIKRSR NIALLPFTTE
|
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| |