| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2601 |
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| Symbol | |
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| ID | 4206087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2835774 |
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| End bp | 2837126 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642567151 |
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| Product | putative cellobiose phosphotransferase enzyme IIC component |
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| Protein accession | YP_699848 |
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| Protein GI | 110803837 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
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| TIGRFAM ID | [TIGR00359] phosphotransferase system, cellobiose specific, IIC component
[TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCTA TGGAGAAATT TCAATCTCAA ATAGAAAAGG TATTAGTGCC GTTAGCTAGT
AAGTTAAATT CACAAAGGCA TATTTGTGCA GTAAGGGATT CATTTATATT AACATTTCCA
CTAACTATGG CAGGATCTTT AATGGTATTA CTTAACTTCG TTTTATTATC ACCAGATGGG
TTCATTTGTA AATTATTAAG GTTAAATAAA ATATTCCCTA ATATAGGTGA ATGTCAAGCT
ATATTTAGCC CAGTATTAAA AGGCTCAACA GATATATTAG CTATATTAAT TGTATTTTTA
ATTGCTAGAA ATTTGGCAAA ACAACTTAAA TCAGATGATT TATTATCAGG ATTAACAGCA
GTATCAGTTT ATTTTATAAT TTACTCAGAT TATGTAAATG TGGATGGCGT AAACTATTTA
ACTACAAAGT TTATGGGGGC ACAAGGATTA TTTGTAGCTA TAATTGTTGG GTTAGTAGTT
GGAGAACTTA TGTCAGTTTT ATCAAAGTCT AAAAGGTTAG AAATTAAGAT GCCAGAACAA
GTTCCACCAG CAGTAGCTAG AACATTTAAA TTATTATTAC CAATAGTTAT AATTACAGTT
TCATTTTCAA TATTAAATTT CTTTATTAAG AAATTTGCAC CAGGTGGATT ACATGAATTA
GTTTATACTG TAATTCAAAC TCCATTAACA CAATTAGGTC AAAATGTAGG ATCAGTATTA
ATATTAACTC TTATATCTCA ATCACTTTGG GTTATGGGAA TCCATGGTCC AAATACTATT
GCAGCAGTAC GTGATACTAT GTTTGCAGAG GCAACAAATG CAAATCTTTC ATATGCAGCA
GCAAATGGTA CTGCATGGGG AGCACCTTAT CCAGTAACAT TTAATGGATT ATATGATGCT
TTTGGAGCAT ATGGTGGTTC AGGAGCAACA TTAGGATTAA TAATTGCAAT ATTTATATTT
AGTAAAGCAA AAGAACAAAA AAGTATAGCA AAGCTTTCAT TTGCACCAGG ACTATTTAAT
ATAAATGAGA TGGTTATATT TGGATTACCT ATAGTATTAA ATCCTATATA TATAATACCA
TTTATATTAA CTCCATTAGT AAATATAACA ATTGGGTATT TAGCAACATC AGTTATGAGG
ATTATACCAC CAGTAGCATA TGGAGTGCCT TGGACAACAC CAGGACCATT AGCACCATTC
TTAGGAACTG GGGGAAATAT TATGGGATTA GTAATAGGAT TAATTTGTTT AGCAGTTAGC
GTATTTACTT ATGCACCATT TGTAATAGCT GCAAGTAAAG CTGAATTAAA AAATGAAGAA
GAAGCAACTT TAAATGAATT TAATAATGTT TAA
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| Protein sequence | MSAMEKFQSQ IEKVLVPLAS KLNSQRHICA VRDSFILTFP LTMAGSLMVL LNFVLLSPDG
FICKLLRLNK IFPNIGECQA IFSPVLKGST DILAILIVFL IARNLAKQLK SDDLLSGLTA
VSVYFIIYSD YVNVDGVNYL TTKFMGAQGL FVAIIVGLVV GELMSVLSKS KRLEIKMPEQ
VPPAVARTFK LLLPIVIITV SFSILNFFIK KFAPGGLHEL VYTVIQTPLT QLGQNVGSVL
ILTLISQSLW VMGIHGPNTI AAVRDTMFAE ATNANLSYAA ANGTAWGAPY PVTFNGLYDA
FGAYGGSGAT LGLIIAIFIF SKAKEQKSIA KLSFAPGLFN INEMVIFGLP IVLNPIYIIP
FILTPLVNIT IGYLATSVMR IIPPVAYGVP WTTPGPLAPF LGTGGNIMGL VIGLICLAVS
VFTYAPFVIA ASKAELKNEE EATLNEFNNV
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