| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2584 |
|---|
| Symbol | |
|---|
| ID | 4206166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2813973 |
|---|
| End bp | 2814851 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642567134 |
|---|
| Product | short chain dehydrogenase/reductase family oxidoreductase |
|---|
| Protein accession | YP_699831 |
|---|
| Protein GI | 110803760 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATG AAAAATTATT CCCAACAACA TTTCCAGTTC AAAATCAAAG TATTCATCCT
GGAGTAGAGG ATGAAATGAA TCCACTACCA ATATATGATT TACCACAGTA TATAAATGAT
GGAAAAAGAC TTAAGAATAA GGTAGCCATA ATAACAGGTG GAGACAGTGG AATAGGAAGA
GCTGTAGCCT TAGGTTATGC AAGAGAAGGG GCTAAAGTTT GTATAATATA TCTATCAGAT
GAAGAGGATA AGGATGCTAA TAAGACTAAG GAACTTATAG AAAGTGCTGG TTCTGAGGCT
TTAGTTATAA AAGGAGATAT TTCTGATATT GATTTTTGTA ATTCAAGTGT AAAGAAGGTC
ATTGAAAAAT GGGGAAAACT TGATATATTA GTTAACAATG CGGCAGTTCA ACATGATTCT
AAAACTTTAG ATGATATTGG ACCAGAGCAA ATAGAAAATA CTTTTAAAAT AAATGTTTTT
GGAACTTTCT ATATGACAAA GGCAGCAGTT AAATACATGG AATGTGGAAG TTCAATAATA
AATACCACTT CTATTACAGC TTATAGAGGA AATGAGATAC TTTTTGATTA TTCATGTACT
AAGGGTGCTT TAACCACAAT GACAAGAACC TTAGCAACGA TGCTAGTTAA GAATGGAATT
AGGGTTAATG CTGTGGCACC AGGACCTATA TGGACACCTC TTATACCATC TTCAATGAAT
AAAAAGAAAG TTTCTGAATT TGGAGTTAAT TCACCTATGG GAAGAGCAGG GCAACCAGTA
GAGCTTGCTG GAGCTTATGT TTTCTTAGCT TGTAATGAAG CATCATACAT ATCAGGTATA
ACAATACACG TAAATGGTGG AGAAATTATA AATGGGTAG
|
|---|
| Protein sequence | MSNEKLFPTT FPVQNQSIHP GVEDEMNPLP IYDLPQYIND GKRLKNKVAI ITGGDSGIGR
AVALGYAREG AKVCIIYLSD EEDKDANKTK ELIESAGSEA LVIKGDISDI DFCNSSVKKV
IEKWGKLDIL VNNAAVQHDS KTLDDIGPEQ IENTFKINVF GTFYMTKAAV KYMECGSSII
NTTSITAYRG NEILFDYSCT KGALTTMTRT LATMLVKNGI RVNAVAPGPI WTPLIPSSMN
KKKVSEFGVN SPMGRAGQPV ELAGAYVFLA CNEASYISGI TIHVNGGEII NG
|
|---|
| |