Gene CPR_2568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2568 
Symbol 
ID4206342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp2795946 
End bp2796617 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content28% 
IMG OID642567118 
ProductLacI family transcription regulator 
Protein accessionYP_699815 
Protein GI110803374 
COG category[K] Transcription 
COG ID[COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGAG TTGGGGAAAG AATAAAAGAG GCTAGAGAAA AAAGTGGAAT GACACAAAAA 
GCTTTAGCTA AAAAGCTAGG TGTAGCTGAG AAGTTTGTAA ATGAAGTTGA AACAGGAAGA 
AAAATTATAA ATGAATCACT TATATCAAAG GTATCAAAGG TTTTAAATAC TGATTTAAAT 
GATATAAATA TGGTTGTTAC TGATGAGGAA CTTCAAAAAG AACTTAAAGC TGAAAAACAA 
TTAAGACAAA CAAAACCAGC AGATGTTAAT GAAGTTTGGA ATCAAGCTTT TGGATCAGTT 
TTAAAAAATG TTCCAATATA TGATTATTCA TTAGCTCAGG TTAAGGGATA TAAACAACTT 
GCTACTGCTT CAAATAAAAT AGATGGTCAT ACAGCGAACA AAGTTTTTTA TTTAAAAATA 
GAAAATAATG ATATGACTGG ATATAGAATT CAAGAGAATG ATTTAGCTTT ATGCTATTCA 
ATAAAAGAGA TAGAAAATAA TTCTATTTGT TTAGTTGAAT TTAATGGAAA AAGAGTTATT 
AGACAAATTA AAAAGCTAGA TAACGTTAAG GCTTTACTAA TAAGTAATAA TGGTAGCATG 
AGAACAGAGA CAGCTAACAT AAAAGAAGTT AAGGCAATTG CTAAGCTTTA TAGAATAGAA 
TTTGATTTAT AA
 
Protein sequence
MSRVGERIKE AREKSGMTQK ALAKKLGVAE KFVNEVETGR KIINESLISK VSKVLNTDLN 
DINMVVTDEE LQKELKAEKQ LRQTKPADVN EVWNQAFGSV LKNVPIYDYS LAQVKGYKQL 
ATASNKIDGH TANKVFYLKI ENNDMTGYRI QENDLALCYS IKEIENNSIC LVEFNGKRVI 
RQIKKLDNVK ALLISNNGSM RTETANIKEV KAIAKLYRIE FDL