| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2566 |
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| Symbol | sleC |
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| ID | 4204164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2792588 |
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| End bp | 2793904 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642567116 |
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| Product | spore cortex-lytic enzyme SleC |
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| Protein accession | YP_699813 |
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| Protein GI | 110803522 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTAG GTAGATTGAA GGTTCAATGT TTTAGCGAAC AAAGGAGATA TATACCTATT
GATAAATGTA AGGTTAAAAT AACACCAACT GGACAAGATG GTATAGCTAT AGGGGATACT
ATAGTATTAT ATACAAATAA TACAGGAAGT ACTGATATTA TTGAATTAGA TGCACCACCA
ATAGAAAATT CTAATCAACC AAATACAATT CCTTATAGTT TTGCAAATGT TATTGCTGAG
AAAGAAGGTT TTTTGCCTGT AGCAGTAAAT GGAGTACAAA TCTATCCTGC AAGAGTGGCA
ATTCAAAATA TTAATTTACC TGAGACTAGG GGATATTATA GACAAGAAAA GATTATAAAT
ATACAGCCTA ACAGATTAGT TGGAAATTTT CCTCCGAAGA TACCTGAACC AGAGGAAAAG
GAACTTCCAC TACCAAAGGG AATAGCAGTA TTGCCAGAAC CTGTAATTCC AGAGTATATA
GTTGTTCATG ACGGGAGACC AAATGATAAT ACAGCACCTA ATTATAAGGT TAATTATAAA
GATTATATAA AAAATGTTGC ATGTTGTGAA ATTTTTTCAA CGTGGCCTGA AACTACTATA
AGAGCTAATG TTTATGCTAT AACATCATTT ACTTTAAACA GGATATATAC TGAATGGTAT
AGAGGAAAAG GTAAAAATTT TGATATAACT AGTTCAACGG CTTTTGATCA TGCTTTTAGT
TATGGAAGAA ACTTTTATGA GAACATAAGT AGAATTGTAG ATGAAATATT CTCAACATAT
ATGAAAAGAA TCAATTCTAA GCAGCCTCTT TTAGCACAGT ATTGTGATGG AATAAAAGTA
CAATGTCCAG GTTGGATGAC TCAATGGGGA AGTAAATACT TAGGAGATGA AGGAAAGGTT
CCTTATGATA TTTTAACCTA TTTTTATGGT GATGATTTAG AATTAAAGTC CGCTAAAAAA
GTTAAGGGAA GTCCAAGATC ATATCCAGGT TATACATTAA AATTTGGATA TTCAGGAGAG
CCTGTAAGAG TTATACAAGA ACAATTAAAT GCTATTTCAA GAGCTTATCC TTTAATACCT
AAGATTGCCG TTGATGGAAA ATATGGTCCT AAAACTAGAG AAGCTGTAAA AACATTTCAA
AAAATATTTG ACCTTCCTCA AACAGGAGAG GTAGATTATG CAACATGGTA TAAAATATCA
GATGTCTATG TTGCAGTAAC AAAAATAGCA GAACTTAGAT CAAGTGTTGA GAAGAAGATA
TTTTATCCAC CAACAATAAT GGATAGACGT GAAAATGTAC CAAAGATAAT TTATTAA
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| Protein sequence | MTLGRLKVQC FSEQRRYIPI DKCKVKITPT GQDGIAIGDT IVLYTNNTGS TDIIELDAPP
IENSNQPNTI PYSFANVIAE KEGFLPVAVN GVQIYPARVA IQNINLPETR GYYRQEKIIN
IQPNRLVGNF PPKIPEPEEK ELPLPKGIAV LPEPVIPEYI VVHDGRPNDN TAPNYKVNYK
DYIKNVACCE IFSTWPETTI RANVYAITSF TLNRIYTEWY RGKGKNFDIT SSTAFDHAFS
YGRNFYENIS RIVDEIFSTY MKRINSKQPL LAQYCDGIKV QCPGWMTQWG SKYLGDEGKV
PYDILTYFYG DDLELKSAKK VKGSPRSYPG YTLKFGYSGE PVRVIQEQLN AISRAYPLIP
KIAVDGKYGP KTREAVKTFQ KIFDLPQTGE VDYATWYKIS DVYVAVTKIA ELRSSVEKKI
FYPPTIMDRR ENVPKIIY
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