| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2561 |
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| Symbol | |
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| ID | 4205806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2787233 |
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| End bp | 2787940 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642567111 |
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| Product | glycerol uptake facilitator glpF |
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| Protein accession | YP_699808 |
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| Protein GI | 110802741 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAATC AATTCTTGGC TGAGCTTTTT GGAACTGCGC TTTTGATATT ACTAGGAGAC
GGTGTAGTTG CAAATATAGC TCTTAAAAAA ACTAAGGGTA ATAGCGCTGA TCTTATTGTA
GTCACTGTAG GATGGGCAAT AGCTGTTGCT ATTCCTGTTT ATATTTTTTC TAGAGTAAGT
GGAGCGGTAT TTAATCCAGC TGTAACTATT GCTTTGGGAA TTACGGGAGG ACTAGCTTGG
AATCAAGTTG TAGTATTTTG TATAGCACAA TTTATAGGTG CTTTCATAGG TGCTGTACTA
GTTTATTTAA CTTATTATAC TCATTTTGAA TCTACTGAAG ATCATGATGC AAAGCTTGGT
ACATTTTGTA CTATACCAGC TATTAGAAAT TACAAATGGA ATTTTTTCAC TGAATTTATA
GGTACTTTTG TTTTAATGTT TGGTATCTTA GGGCTTGGTG ATGCAAAAAT GGTAGATGGA
ATTATGCCAA TAGCCGTTGG ATTATTAATT TTAGTTATAG GAGTATCTTT AGGCGGACCA
ACTGGATATG CAATTAATCC AGCTAGAGAT TTCTCACCTA GACTTGCACA TTTCTTGCTT
CCTATGAAAA ATAAGGGAGG CTCAGATTGG GCTTACGCTT GGATTCCAAT TGTAGGACCA
ATACTTGGTG CTATAGCAGG AGCAATAGTA TATACAAATA TATTTTAA
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| Protein sequence | MVNQFLAELF GTALLILLGD GVVANIALKK TKGNSADLIV VTVGWAIAVA IPVYIFSRVS
GAVFNPAVTI ALGITGGLAW NQVVVFCIAQ FIGAFIGAVL VYLTYYTHFE STEDHDAKLG
TFCTIPAIRN YKWNFFTEFI GTFVLMFGIL GLGDAKMVDG IMPIAVGLLI LVIGVSLGGP
TGYAINPARD FSPRLAHFLL PMKNKGGSDW AYAWIPIVGP ILGAIAGAIV YTNIF
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