Gene CPR_2550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2550 
SymbolileS 
ID4204858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2772809 
End bp2775928 
Gene Length3120 bp 
Protein Length1039 aa 
Translation table11 
GC content33% 
IMG OID642567100 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_699797 
Protein GI110801907 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAA AAGTTGAATT ACCTAAGGGC TTTGTAGGCG TAGAAAAAGA AGTTGCAAAC 
CTTTGGAAAG AAAGAAACAT AATACAAAAG AACTTTGACA TGAATCAAGA TGGTGAATAC
TTTACTTTCT ATGATGGACC TCCAACAGCT AATGGTAAAC CACACGTAGG TCACGTATTA
ACAAGAGTTA TGAAAGATAT AATCCCAAGA TACAAAGTTA TGAAGGGATA TAAAGTTATA
AGAAAAGCTG GATGGGATAC TCATGGACTT CCAGTTGAGC TTGAAATAGA GAAAAAGTTA
GGAATTTCAG GTAAACCTCA AATAGAGGAT TACGGTGTTG AAAAATTCGT AACTGAGTGT
AAAGATAGTG TATTCACATA TGTTAGCATG TGGGAAAAAA TGACTGAGCA AATAGGTTAT
TGGGTAGATA TGGAGAATCC ATATGTTACT TACCACAATC CATACATAGA ATCAGTATGG
TGGGCTTTAA AACAAATGTG GGATAAAAAA CTTTTATACA AAGGTTATAA AACAATGCCT
TACTGCCCAA GATGTGGAAC AAGTTTATCA TCACACGAAG TTTCACAAGG ATACAAGGAT
GTTAAGGACT TAACTGCTGT AGCTAAGTTT AAAGTTAAAG GAGAAGATAA TAAGTACTTC
TTAGCTTGGA CAACAACTCC TTGGACTTTA CCTTCAAACG TTGCTTTATG TATAAATAAA
GCTTATGACT ATGTAGAAGC TAAGCAAGCT GAAGGTGATG AAATCTTAAT CTTAGCTAAA
GAATTAGCAC CTAAGGTTTT AGGAGAAGGA TTTGAAATAG TTAGAGAGTT CAAAGGTGAA
GAATTATTAG GAATGGAATA CGAGCAATTA TTACCATTTG TAACTCCAAC TGAAGGAAAA
GCTTTCGTAG TTGTTCATGG TGACTACGTA ACTTTATCAG ATGGTACTGG TATAGTTCAT
ATAGCTCCTG CTTATGGTGA GGACGATAAC TTAATAGGAA AGCAAAATGG ATTAGCATTC
TTAAACTTAG TTGACTTAAG CGGTAACTTT GTAGAAGAAG TAACTCCATG GGCTGGAAAA
TTCGTTAAGA AATGTGACCA ACAAATCGTT GATTACTTAA AAGAACAAAA TAAATTATTT
AAAGCTGAAA AGCATACTCA CTCATATCCA CATTGTTGGA GATGTGACAC ACCACTTCTT
TACTATCCAA AAGAAAGCTG GTTTGTTGCA ATGACAACTT TAAGAGACAA ACTTTTAGCT
AACAATGAAA AAATAAATTG GTACCCAGAC AACATCAAGA ACGGTAGATT TGGTAAGTTC
TTAGAGAATG TTATAGATTG GGGTATCTCA AGAGATAGAT ACTGGGGAAC TCCACTTCCA
ATATGGGAAT GTGAATGTGG ACACAGAGAA TGTATAGGAA GCATTGAAGA GTTAAAAACT
AAAGGAATAA ATGTTCCAGA AGATATAGAA CTTCATAAAC CATACATCGA TAAAGTTCAT
TTAAATTGTC CTCATTGTAA TAAAGAGATG AAGAGAACAG CTGAGGTTAT AGACTGTTGG
TTTGATTCAG GATCAATGCC ATTTGCTCAA CATCACTATC CATTTGAGAA CAAAGAATTA
TTTGAAGCTA ACTACCCAGC TCAATTCATA TCAGAAGCTG TTGACCAAAC AAGAGGATGG
TTCTATACAT TATTAGCAAT ATCAACTGCT ATATTTGATA GAAATCCATT TGAAAACTGT
ATAGTTTTAG GTCACGTTCT TGATAAGAAG GGATTAAAAA TGTCAAAATC TAAGGGTAAC
GTAGTTGATC CATTTGAAGT ACTTGATTCA CAAGGTGCTG ATGCTACAAG ATGGCATTTC
TATACTGCAA GTGCTCCATG GTTACCAACT AGATTCTCAA TAGAAGATGT TGCTGAAACT
CAAAGAAAAT TCTTAAGCAC ATTATGGAAT GTTTACTCAT TCTATGTTTT ATATGCAGAG
TTAGACAACT TTAATCCATT AGACTACAAA GATTTCGTAT CAGATAACGT AATGGATAAA
TGGATAATGT CAAAACTTAA TACTTTAGTT AAGGATGTAG ATGATCATTT AAATAATTAT
AGAATAACTC AAGCTGCTTT AGAAATAGAA GAGTTTACTG ATGAATTATC AAACTGGTAT
GTAAGAAGAA ATAGATCTAG ATACTGGTCA GAAGAATTAA CTGATGACAA GATAGGTGCA
TACACTACTT TATACAGAGT TTTAGTAACT TTATGTAAAG TTGCAGCTCC ATTCGTACCA
TTTATAACAG AAGAAATCTA TCAAAACTTA GTAGTTAATT TAGATGAAAA TGCTTTAGAA
AGTATCCACT TAGGAGCATG GCCAGAAGTT GATGAAAAGG CTATAGATAA AAAATTAGAA
GAAAAAATGG ATTTAGCTTA TAAGATAGTT AAACTTGGAA GAAGTGCTAG AAACGGTGCT
AACATCAAGA ATAGACAGCC ACTTTCAAAA ATGCTTCTTT CAACTTCAGA GCTTCCAGAT
TATTATGGAG ACATAATTAA AGATGAGTTA AACATCAAGG AAGTAGAATT AGGAGCTGAC
CTTTCTAAAT ATGTTAACTT CGAAATTAAG CCTAACTTAC CTGTTTTAGG AAGAGCTTAT
GGTAAGTTAA TACCAGCTAT AAGAAAAGAA ATAGCTTCAA GAAACCAAAT GGAATTAGCT
CAAAAAATCC AAAATGGTGG AGTAGAAGTT ATCACTGTGG ATGGAAATGA AATAGAATTA
AATGCTGAAA ACTTACTTGT AACAATGCAA GGATTAGAAG GATTCGCATT TGCTGGAGAA
GGATCAGTTG GTGTTGTTTT AGATACTACT ATAACTGATG AATTAAGAGA AGAAGGTCAT
GTAAGAGAAA TCATATCAAA AATCCAAAAC ATGAGAAAAG AAAGTGGATT TGAGGTTGCT
GATAAGATAA CTCTTTACGT AGCTGAAAAT GATATGCTTT TAGATGTAAT CAAGAAATTT
GAAGATGTTA TAAAGAAAGA AACTTTAACA GAAGAAATTG TTTATAACGG AGATGCTGAT
TACTCAGAAG CTAAAGTAAA TGGTGAAATA TTAAAAATGG CTGTTTCAAA AAGAGCTTAA
 
Protein sequence
MYKKVELPKG FVGVEKEVAN LWKERNIIQK NFDMNQDGEY FTFYDGPPTA NGKPHVGHVL 
TRVMKDIIPR YKVMKGYKVI RKAGWDTHGL PVELEIEKKL GISGKPQIED YGVEKFVTEC
KDSVFTYVSM WEKMTEQIGY WVDMENPYVT YHNPYIESVW WALKQMWDKK LLYKGYKTMP
YCPRCGTSLS SHEVSQGYKD VKDLTAVAKF KVKGEDNKYF LAWTTTPWTL PSNVALCINK
AYDYVEAKQA EGDEILILAK ELAPKVLGEG FEIVREFKGE ELLGMEYEQL LPFVTPTEGK
AFVVVHGDYV TLSDGTGIVH IAPAYGEDDN LIGKQNGLAF LNLVDLSGNF VEEVTPWAGK
FVKKCDQQIV DYLKEQNKLF KAEKHTHSYP HCWRCDTPLL YYPKESWFVA MTTLRDKLLA
NNEKINWYPD NIKNGRFGKF LENVIDWGIS RDRYWGTPLP IWECECGHRE CIGSIEELKT
KGINVPEDIE LHKPYIDKVH LNCPHCNKEM KRTAEVIDCW FDSGSMPFAQ HHYPFENKEL
FEANYPAQFI SEAVDQTRGW FYTLLAISTA IFDRNPFENC IVLGHVLDKK GLKMSKSKGN
VVDPFEVLDS QGADATRWHF YTASAPWLPT RFSIEDVAET QRKFLSTLWN VYSFYVLYAE
LDNFNPLDYK DFVSDNVMDK WIMSKLNTLV KDVDDHLNNY RITQAALEIE EFTDELSNWY
VRRNRSRYWS EELTDDKIGA YTTLYRVLVT LCKVAAPFVP FITEEIYQNL VVNLDENALE
SIHLGAWPEV DEKAIDKKLE EKMDLAYKIV KLGRSARNGA NIKNRQPLSK MLLSTSELPD
YYGDIIKDEL NIKEVELGAD LSKYVNFEIK PNLPVLGRAY GKLIPAIRKE IASRNQMELA
QKIQNGGVEV ITVDGNEIEL NAENLLVTMQ GLEGFAFAGE GSVGVVLDTT ITDELREEGH
VREIISKIQN MRKESGFEVA DKITLYVAEN DMLLDVIKKF EDVIKKETLT EEIVYNGDAD
YSEAKVNGEI LKMAVSKRA