| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2516 |
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| Symbol | nrdD |
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| ID | 4204648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2735259 |
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| End bp | 2737376 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642567066 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | YP_699763 |
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| Protein GI | 110802339 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACATG TTGTGAAAAG GGACGGTAGA GAATCTAGGT TTAATGCGGA TAAAATAGCA
AATGCAATAA AGAGAGCAGC CAATGAAGTT GGTATTGCAA TAAGGGAAAG CCAAGTTTTA
GATACTATAC AAAAGGTAAT TAATTATATA GAAATGTCAG GTAAGACAGA TGTCACTGTT
GAAGAAATTC AAGTTTTAGT AGAAAAGGCT TTAATGGATA ATGGTTTTAA CCAAGTAGCA
ACAGCATATA AGGCATATAG AACTGAAAGA ACTAAAGTTA GAGAAATAAA ATCAGACTTA
ATGAAAGCTA TAAGTAAGAT CGGAGTAGAG ACTGATAGAG ATAATGCCAA TGTAGGAAAT
AACTTCTCAT CAAAGCTTTT AAGAATAGCT TCAGAATCTA ACAAATGGTA TAATTTAGCT
ACAATGCCTA AAGAATTAGC AAAAGCTCAT GAAAATGGAG ATGTGTATTA TCATGACTTA
GATAGTTATA ACTTAACTAC TAACTGCTTA CACATACCAA CTGGTGAGTT ATTACAAAGT
GGATTTAACA CTGGATACGG AACTATTAAT GCACCAAGAA GAATAGAGAC AGCAGCAGAA
TTATCATGTA TTTTATTACA ATCAACTCAA AATGATATGT TTGGAGGACA ATCACATCCA
GACTTTGATA ATGATATGAG TGTTTTTGTA GAACCTACAA GACAAGAGAT AAGAGAAGAA
TACATAGGAT TAGGCTTAGA AGGAGCTAAA TTAGATGAAC TAGTAGAGAA AAAATTAAGA
GAAAGAGTGC ATCAAGCAAT GCAAGGAGTT GTTTATAATT TAAACACTAT GCATTCAAGA
GCAGGATCTC AAGTTCCTTT TAGTTCATTA AACTTAGGAA TTCCATACAA TGAAGATGCT
GCTTTAGTTT GTGAAATATT CTTATTAGAA TACGAAAAAG GATTAGGAAG AGGAGAACAA
CCAATATTCC CTAATATAAT CTTTAGAGTA AAAGAAGGTG TAAATAGAGA AGTAGAGGAT
CCATATTTCT ATTTATATGA ATTAGCTTGT AGAGTAGCAG CTAAGAGAAT GAATCCAACT
TTCATGAATA TCGATGCGGA CTTTAATAAG GAATACTATG ATAAGGGATA TATGCCAGCA
ACTATGGGAT GTAGAACTTA TCTTATGAAA AATGTTAATG GTGAACCAGG ATGTAAAGGA
AGAGGAAATA TAGCTCCTAC AACTATAAAC CTTCCTAGAC TTGGAATATT AGCTAAAAAA
GATATTAATA AATTCTTTGA TTTATTAGAT GATAGATTAA GAATAGCTAA AGAATCTTTA
ATGCACAGAT ATGGGGTTCT TAAAAACTTA AAAGTTAAGG ATTTGCCTTT TGTTGCAGGT
CAAGGATTAA TGAAAGGTGC TGAAAACTTA GGCCCAGATG ATTCAATAGA ACCAATTTTA
AAACAAGGTA CTTGGGGAAT TGGATTTATA GGAATTGCAG AAACTTTAAT AGCCTTAACT
GGAAAGCATC ATGGTGAAGA TGAAACTTCA AGAGAATTAG GAATAAAAAT AGTTGAGAGA
ATAAGAGAAT ATTGTGATAG ATTAACTGAG GAAACTAGAT TAAACTGGAG CTGTTATGCT
ACTCCAGCAG AAGGATTATC AGGTAAATTT ATAAAGCAAG ATAAAAAAGC CTTTGGAATA
ATTAAAGGAG TAACAGATAA AGATTACTAT ACAAATAGTT ACCATGTTCC TGTTTACTGC
CCAATGTCAA TAAAAAATAA GATAGATATT GAAGCACCAT ATCATAAATT ATGTAATGGT
GGACATATCA GTTATATAGA AGTTGATGAT TGTCCAAATG CAGAAACTAT AATGAAAATA
GTTAACTATG CTTATAAAGA AACTAATATA AGTTATATGG GAATTAACTT CCATATAAGA
TATTGTAAAA ATTGTGGAAC ATATCTTCAT AATAATGAGT GCAAATGTAC TAAATGTGGA
TGCCAAGATA TTCAAGGGAT ATCAAGGGTT ACTGGATACT TAAGTCTTGA TGAAAGATTT
GGTCCAGGAA AATATGAAGA GAGAGAAGAT AGACGTTCTC ACTTAGAAGG AAATAAAAAA
GCTTATCACT GTGTTTAA
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| Protein sequence | MLHVVKRDGR ESRFNADKIA NAIKRAANEV GIAIRESQVL DTIQKVINYI EMSGKTDVTV
EEIQVLVEKA LMDNGFNQVA TAYKAYRTER TKVREIKSDL MKAISKIGVE TDRDNANVGN
NFSSKLLRIA SESNKWYNLA TMPKELAKAH ENGDVYYHDL DSYNLTTNCL HIPTGELLQS
GFNTGYGTIN APRRIETAAE LSCILLQSTQ NDMFGGQSHP DFDNDMSVFV EPTRQEIREE
YIGLGLEGAK LDELVEKKLR ERVHQAMQGV VYNLNTMHSR AGSQVPFSSL NLGIPYNEDA
ALVCEIFLLE YEKGLGRGEQ PIFPNIIFRV KEGVNREVED PYFYLYELAC RVAAKRMNPT
FMNIDADFNK EYYDKGYMPA TMGCRTYLMK NVNGEPGCKG RGNIAPTTIN LPRLGILAKK
DINKFFDLLD DRLRIAKESL MHRYGVLKNL KVKDLPFVAG QGLMKGAENL GPDDSIEPIL
KQGTWGIGFI GIAETLIALT GKHHGEDETS RELGIKIVER IREYCDRLTE ETRLNWSCYA
TPAEGLSGKF IKQDKKAFGI IKGVTDKDYY TNSYHVPVYC PMSIKNKIDI EAPYHKLCNG
GHISYIEVDD CPNAETIMKI VNYAYKETNI SYMGINFHIR YCKNCGTYLH NNECKCTKCG
CQDIQGISRV TGYLSLDERF GPGKYEERED RRSHLEGNKK AYHCV
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