Gene CPR_2513 details

Gene Information

• Locus tag: CPR_2513
• ID: 4205142
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 2731434
• End bp: 2732042
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 642567063
• Product: HD domain-containing protein
• Protein accession: YP_699760
• Protein GI: 110803215
• COG category: [R] General function prediction only
• COG ID: [COG1418] Predicted HD superfamily hydrolase
• TIGRFAM ID: [TIGR00277] uncharacterized domain HDIG

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAATC AAAACTTATT TTTAGAAATA GAAAAACATT TATTAGAGGA TGCTAAGCCA 
TCCATATTCT TAAATAAAAT TAAAGAGAAA GACTCATTTA AAAATTCTTC TTTTAATATT 
TTCAACCAAC TTAATAATGA AAATCAAATC AATGAATCTA ATCCTTGGAC CCATACATTA 
AATGTAGTAG ACCTAGCTTC AAAATACAAA GATTTATCTA ATAACCCAAA AGCTTTTATG 
TGGGCAGCCT TATTCCATGA TATTGGAAAA ATAAGAACTC TAAACCCAAT CCATGATAGA 
ATTGGAGGAG AAATAACAAG AAGGTTCCTT AGAGAATATA GTGATGATAC TTACTTAAAC 
GAAAAAATTA TATCTCTAGT AAAGCATCAT TCTGCACCTA TATTTATTAT TAATAGAGTC 
TCTTATAGCA TAATAGATTT AATAAACACG GCAGATATTC ATGATGTTGC CTTATTATCA 
CTATGTAATA GGCTGAGAAA CCTAAGTTCT AAAAATAATG ACTTAGAGAA AAATCTTTTA 
GATAGTAATA AATTTCTTAA AATCATGTCT AGTAAAACCT GCTTACCATT AAAAGAAATA 
ATAGTATAA 

 

Protein sequence

MTNQNLFLEI EKHLLEDAKP SIFLNKIKEK DSFKNSSFNI FNQLNNENQI NESNPWTHTL 
NVVDLASKYK DLSNNPKAFM WAALFHDIGK IRTLNPIHDR IGGEITRRFL REYSDDTYLN 
EKIISLVKHH SAPIFIINRV SYSIIDLINT ADIHDVALLS LCNRLRNLSS KNNDLEKNLL 
DSNKFLKIMS SKTCLPLKEI IV