Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2503 |
Symbol | |
ID | 4204014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 2720229 |
End bp | 2721248 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642567053 |
Product | transcriptional regulator |
Protein accession | YP_699750 |
Protein GI | 110801509 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.117668 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGTAA CAATAAATAA TATTGCAAAA GAAGCGGGAG TTTCTCTAGC TACAGTTTCT AGAGTTATAA ATAATTCTGG ATATGTAAAA AAGGAAACTC GTGAAAATGT TATAAAAGTT ATAAATAAAT ATAATTATAC CCCTAGCGCT ATTGCTAGAA GTCTTTCAAA AAGTATTACT AATACTATTG GAGTTATAGT TCCTGATATT ACAAATCCAT TCTTTGGATC AATAATAAAA GGAATAAGTG ATGTTGCAGA AGTACATAAT CTAAATTTGA TTCTTTGTGA CTCTAATGAA AGCATAGATA GAGAAATAAA AGCTATTAAG ACATTAAAGG AACAAAGAAT TAGAGGCATT ATAATTTGTC CAACCTCTGT TGAAAATGAT TTAAATAGTG AGTATCTAAA AACTATTACT AATTTAGGTA TACCAGTAAT ATTAATTGAT GGAAGTCTTA AATATCACAA TTTTAACGGT GTTTTTGTGG ACAATATTAA AGGTTCTTAT GACGCCATAG AAGCATTAAT TAATGCTAAT CATAAAGATA TAGCAATAAT TACTGGGCGT ATGACATCTA AACCAGCTCA GGATAGATTG TTAGGATATG AAAAAGCATT ATTAATGAAT AATATTCCTA TAAATAATGA CTTAATTTTT TATGGAAATT ATGAAGAAGA AAGTGGATAT GAATGTACTA AGAAAATCTT AGCTATGAAA AATAGACCTT CAGCCATTTT TGTATGCAAT AATCTTATGA CTTTAGGTTG TTTAAAAGCT TTAAGAGAAG CAAAACTTGA ATTATCAAAA GATATTTCAT TAATCTCCTT CGATAATATA CCTATATTAG ATACACTAGG TATAAATATT AGTCATATAA ATGGGCCAAC TAAAGAACTT GGAGAGATTG GTATGGATTT ATTAATAGAA TCCTTGAATA ATGACTCTAA AAAAGAATTA AATAGTATAA CAATAACTCC TGAACTTGTT TTAAAAGGTT CAGAAAAGTT AATAAAATAA
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Protein sequence | MSVTINNIAK EAGVSLATVS RVINNSGYVK KETRENVIKV INKYNYTPSA IARSLSKSIT NTIGVIVPDI TNPFFGSIIK GISDVAEVHN LNLILCDSNE SIDREIKAIK TLKEQRIRGI IICPTSVEND LNSEYLKTIT NLGIPVILID GSLKYHNFNG VFVDNIKGSY DAIEALINAN HKDIAIITGR MTSKPAQDRL LGYEKALLMN NIPINNDLIF YGNYEEESGY ECTKKILAMK NRPSAIFVCN NLMTLGCLKA LREAKLELSK DISLISFDNI PILDTLGINI SHINGPTKEL GEIGMDLLIE SLNNDSKKEL NSITITPELV LKGSEKLIK
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