| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2496 |
|---|
| Symbol | |
|---|
| ID | 4204009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2712148 |
|---|
| End bp | 2713557 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 642567046 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | YP_699743 |
|---|
| Protein GI | 110801504 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATATC GTGGCTTAGT TCCAAAGTTA ATTTTAACAC TAAGCGTAAC AATATGCATT
ACTTTCTTTA TTGTAGGCAT AATACTTTCT AGCTTGTTTA GAGAAGAATA TTATCAAGAA
AGATTAAAAA CTTTATCTGG GGAAGCTGAA GTTATAGAAC AAGTTGTAAA TTCATTTATG
AATAGTGAAA CTACTTTAGT TGAATTAGAT AAATCTATAT CATTTATAGG AGATTCTTTA
AAAGCAGATA TTTATTTAAT TGATAGTTAT GGTTACATAT ACTCAGTTTC TAATGAAAAA
TATGATTATT TAAAACGCAC AAAAATAAAT GATGATGATA TGAAAATATT AAAGGAAAAT
ACTCCTATAG AACAGAAGAA AAAAAATGAA TTTATATATT CTAAGCCTAT TTTCTGTAAA
GGGGTATTTA CAGGAGCCGT TTCAATAGTT ACTCCTTTAA GTACTTTATC AGATTCTCTT
GTTAGAATTA ATCAAATTGT ATGGATGTGT GTAGCTATAG ATATAATTTT TTCAGGACTA
TCAATATATT TTATTTCAAA AAAGATAATC ATAAAACCTT TAAAGGTTAT AAATAATGCT
GCTAAAAAGA TTGCTAACGG AGAAATTGGA AATAGAGTTA ATGTTTCTTA TGATGATGAG
GTTGGTGAAT TAGCTGAATC GTTTAATATA ATGGCAACAT CTATTGAGGA AGCTGAATTA
AATAGAAGGG AATTTATATC TAATGTATCT CATGAGTTAA GATCGCCAAT GACATCGATT
AAGGGCTTTA TAACTGCTAT ATTAGATGGG GTTATTCCTA AGGATAAAGA AGAATATTAT
CTTGTTATAG TAAATGATGA GATAAGTAGA TTAACTAGAC TTATAAATGA CTTACTAGAT
TTATCTGCTA TGCAAGCTGG GAAACTAGAG TTTAATATAA GTGAGTTAGA ATTAAATAGA
ATCATAGAGA CAACTGTATT AAAGATGAAT CAAAAGTCTG CAAGTAAAAA CATAAAAATT
GAAGTTCTTT TAGAAAGCGA AAAATTATAT GTTTATGGAG ATAATGATAG ATTAATACAA
GTTGTTACTA ACTTAGTTGA TAATGCTATA AAATATTGCG ATGAAAATGG TGAAGTTAAA
ATATCAACTA AAACAAAGGG AAGTAAGATT ATTGTTAGCA TATTTAACAC TAGCAAAGGA
ATAGACGAAT ATGATTTAAC TCATATTTGG GACAGATTTT ATAAAGTTGA CAAGGCAAGA
AGTAATAAAA CTAGTACAGG GTTAGGATTG TCTATTGTTA GAAATATAAT ACTGCAACTA
GAAGAAGATA TTTGGGCTGA AAATGTCAAA GATAAAAATG GTGAAATAAA AGGTGTTAGA
TTTAATTTTA CTTTAACTAA AGTTAAATAA
|
|---|
| Protein sequence | MRYRGLVPKL ILTLSVTICI TFFIVGIILS SLFREEYYQE RLKTLSGEAE VIEQVVNSFM
NSETTLVELD KSISFIGDSL KADIYLIDSY GYIYSVSNEK YDYLKRTKIN DDDMKILKEN
TPIEQKKKNE FIYSKPIFCK GVFTGAVSIV TPLSTLSDSL VRINQIVWMC VAIDIIFSGL
SIYFISKKII IKPLKVINNA AKKIANGEIG NRVNVSYDDE VGELAESFNI MATSIEEAEL
NRREFISNVS HELRSPMTSI KGFITAILDG VIPKDKEEYY LVIVNDEISR LTRLINDLLD
LSAMQAGKLE FNISELELNR IIETTVLKMN QKSASKNIKI EVLLESEKLY VYGDNDRLIQ
VVTNLVDNAI KYCDENGEVK ISTKTKGSKI IVSIFNTSKG IDEYDLTHIW DRFYKVDKAR
SNKTSTGLGL SIVRNIILQL EEDIWAENVK DKNGEIKGVR FNFTLTKVK
|
|---|
| |