Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2483 |
Symbol | |
ID | 4204961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2699130 |
End bp | 2699534 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642567033 |
Product | hypothetical protein |
Protein accession | YP_699730 |
Protein GI | 110802862 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1098] Predicted RNA binding protein (contains ribosomal protein S1 domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000579369 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTTAA TGGCAGGAAA CATATTAGAG GGTAGAATAA TTAACATCAC AAACTTTGGT GCGTTTGTTG AAGTGGAAGG AAAGACAGGT TTAGTTCATA TATCTGAAGT AGCAGATACT TATGTTAAAG ATATAAGAGA GCATCTTAAA GAAGATGATA AAGTTAAAGT GAAAGTAATA TCAGTTGATG ATAAAGGCAA AATAAGCTTA TCAATAAAGC AAGCTATGCC ACCAAAGAAG AAATCTGTTA AACCTGCAGA TTTTGACTGG AACAATGAAA AGAAAGCTAA GCCAAAACAA AACTTTGAAG ATATAATGTC AAAGTTTTTA AAGGATAGTG AAGAAAGACT TCAAGATGTA AAAAAACATC AAGATGTAAA ACAAAGAAAA AGAAAATCAA TATAA
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Protein sequence | MTLMAGNILE GRIINITNFG AFVEVEGKTG LVHISEVADT YVKDIREHLK EDDKVKVKVI SVDDKGKISL SIKQAMPPKK KSVKPADFDW NNEKKAKPKQ NFEDIMSKFL KDSEERLQDV KKHQDVKQRK RKSI
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