Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2443 |
Symbol | |
ID | 4204099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2660250 |
End bp | 2661155 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642566991 |
Product | PSP1 domain-containing protein |
Protein accession | YP_699705 |
Protein GI | 110801682 |
COG category | [S] Function unknown |
COG ID | [COG1774] Uncharacterized homolog of PSP1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAAG TAATAGGAGT CAGATTTAAA AAAGCTGGTA AAATATATTA CTTTGGTCCT AATGGTATAG ATATAAAGAA GGGTCAAAAC GTAATTGTTG AAACTGCTAG AGGTATTGAA TTTGGAGAAT GTGTAATTGG TATAAGAAAA ATTAGTGAAG AGGATATCGT TGCACCATTA AAATCTGTAT TAAGATTAGC TACAGAGGAA GATATAAATA AGCATAAGGA GAATAAAGCT AAAGAGACAG AGGCTTTTGA AATATGCTTA AAGAAGATAG AAGAACATAA TTTAGTAATG AAACTAATAG ATGTAGAATA TACATTTGAT AATAATAAGG TTATATTCTA CTTTACTGCA GAGGGTAGAG TTGACTTTAG AGAATTAGTA AAAGATTTAG CAACTATATT TAAGACAAGA ATAGAGCTTA GACAAATAGG GGTTAGAGAT GAGGCTAAAA TGATAGGTGG ACTTGGACCA TGTGGAAGAC CTCTTTGTTG CTCTACATTC TTAGGAGACT TTGCTTCAGT TTCAATAAAA ATGGCTAAAG AACAGAGCTT ATCACTAAAT CCAACTAAGA TATCAGGAAT ATGTGGAAGA CTTATGTGTT GTTTAAATTA TGAGCAAAGC ACATATGAAG AAATAAGAAA AGAACTTCCT AGAGTAGGAT CTGTAGTTGA GACTGAACTT GGAAAAGGTG AAGTAGTAGG TAACAACGTA TTAAAGGAAT TAGTAAGAGT TAAATTACCA AGAAAAAATG AAGAGATTAT ACAAGATTTT AAAATTTATG ATGTAAAATT AATCTCAGGT AGCTATGAAG GTGAAGTAGA GGATACAAAC ATTAGATTAG AAATTACTGA TGAAGCGGAT AAAGCATTAA TTAAAAATCT AATAAAAGAT AATTAA
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Protein sequence | MIEVIGVRFK KAGKIYYFGP NGIDIKKGQN VIVETARGIE FGECVIGIRK ISEEDIVAPL KSVLRLATEE DINKHKENKA KETEAFEICL KKIEEHNLVM KLIDVEYTFD NNKVIFYFTA EGRVDFRELV KDLATIFKTR IELRQIGVRD EAKMIGGLGP CGRPLCCSTF LGDFASVSIK MAKEQSLSLN PTKISGICGR LMCCLNYEQS TYEEIRKELP RVGSVVETEL GKGEVVGNNV LKELVRVKLP RKNEEIIQDF KIYDVKLISG SYEGEVEDTN IRLEITDEAD KALIKNLIKD N
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