| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2426 |
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| Symbol | ispD |
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| ID | 4205132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2644050 |
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| End bp | 2644727 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642566974 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_699688 |
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| Protein GI | 110803205 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAAAAG TAGTTAGCGT AATATTAGCA GGTGGAAAAG GAAAAAGAAT GGGGGCTGAA
GTTAGTAAGC AATTCATTGA AATAAATGGA AAACCTATAA TATATTATAC TTTAAAAGCT
TTTGAGGAGT GTAAAGATAT TGATGAAATA ATACTTGTTC TACCTAAGGA TGAAATAGAT
TATTTTAAAA GAGAAATAGA ACCTAGATTT GATTTTAAAA TATCTAAAAT TATTGAAGGT
GGAAAGGAAA GACAGGATTC AGTTTACAAT GCATTAAATT CCATAGGAGA TTGTGATATT
GTTTTAATAC ATGATGGAGC AAGGGCTTTT GTAAGCAATA AAATAATAGA AGACGGAATA
AAGTATTCTA GAGAGTTTGG AGCAGCAGCT CCAGGTGTTA TGCCAAAGGA CACTATAAAA
GTTAAAAATT TAGAAGGATT CTCTGTGGAT ACACCAAATA GAGCATCTTT AGTAGCTGTT
CAAACTCCAC AATGCTTTAA ATATAATTTA ATAAAAAAAG GTCATAACAA AGTTAAAAAT
GAAAAGATTC AAGTTACGGA TGATACTATG ATAGTAGAAC TTTTAGGAGA AAAAGTTTAT
CTTTTTGAAG GTGACTATAA AAACATAAAG GTTACAACAC CAGAAGATTT AATATTAGCA
GAACATTTTG TTAAGTAA
|
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| Protein sequence | MGKVVSVILA GGKGKRMGAE VSKQFIEING KPIIYYTLKA FEECKDIDEI ILVLPKDEID
YFKREIEPRF DFKISKIIEG GKERQDSVYN ALNSIGDCDI VLIHDGARAF VSNKIIEDGI
KYSREFGAAA PGVMPKDTIK VKNLEGFSVD TPNRASLVAV QTPQCFKYNL IKKGHNKVKN
EKIQVTDDTM IVELLGEKVY LFEGDYKNIK VTTPEDLILA EHFVK
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