Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2424 |
Symbol | cysS |
ID | 4204264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2640479 |
End bp | 2641879 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642566972 |
Product | cysteinyl-tRNA synthetase |
Protein accession | YP_699686 |
Protein GI | 110803392 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0215] Cysteinyl-tRNA synthetase |
TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTAAGG TTTATAATAC TTTAAACAAG AAAAAAGAAG AATTCATTCC TTTAACTCCA GGAGAAGTTA AAATGTATGT TTGTGGTCCT ACTGTGTACA ACTTTTTTCA CATAGGAAAT GGTAGAACAT TTATAGTTTT TGATACTATA AGAAGATATT TTGAATACAG AGGATTCAAA GTTGATTTTG TTCAAAACTT TACAGATATA GATGACAAGA TGATAAAAAA GGCTAATGAA GAAGGCATTA CTGTAAAGAA GATTGGAGAT ACGTATATAA AAGAGTATTA CCAAGATGCA GATGCATTAA ATATAGAAAG AGCTACAGTT AATCCAAGAG CTACAGAATT TATTGGAGAG ATAATAAAAT TTGTTAAGGG ATTAGTGGAT AAAGGATATG CTTATGAAGT TGATGGAGAT GTTTATTTCT CAACTAAGAA GTTTGAGGGA TATGGAAAGT TATCAGGACA AAACATAGAA GATCTTCAAT CAGGTGCTAG AATAAGTGTT GATGAAAGAA AAAAAGATCC AATGGACTTT GCTATATGGA AAGCTCAAAA ACCAGGTGAA CCAGCTTGGA ATAGTCCTTG GGGAATGGGA AGACCAGGAT GGCATATAGA ATGTTCATGC ATGGCTAAAA AATTATTAGG TGAAACTATA GATATTCACG CTGGTGGATC AGACTTAAAA TTCCCTCACC ATGAAAATGA AATAGCACAA AGTGAAGCTT TAACAGGTGA ACCTTTTGCA AGATATTGGT TACATTCAGC CTTTGTTAAT GTAAACAATG AAAAAATGTC AAAATCATTA AATAATTTCT TTACTGCAAG AGAAATATTA GAAAGATATG ATGCTGATGT TATAAGATTT TTAATGTTAT CAGCTCACTA TAGACAACAA CTTAACTTTA GTGAAGACTT ATTAGAGTCA GCTAAAGCTT CAGTTGAAAG AATATACAAT GCTATAGGAA ACTTAGAAAA CTTAATAGAT GAAGTTTCTA GAGAAGAAAT GAATGAGGAA GAAAAAGCTT ACTTAGAGTC ATTAAATAAA TATAAAGAAA AATATATTGA AAAAATGGAT GATGATTTTA ATACAGCAGA TGCTATAACG GCTATATTTG ATTTAATAAA AGATACTAAT ACAAATATAA CAATTGACTC ATCAAAGGAA TTAGCTCAAA AAGCTTTAGA GTTAATAAGA GAATTGGGAG CTCCATTAGG AATGTTCCAA AAATCAACTA AAGGAAATCT AGAAGAAGAG ATTGAAGCTT TAATAGCTAA GAGACAACAA GCTAGAAAAG ATAGAGATTT TGCTTTAGCT GATAAAATAA GAGATGAATT AAAAGATAGA GGAATTGTCT TAGAAGATAC ACCTCAAGGT GTTAGATGGA AGAGGATATA A
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Protein sequence | MIKVYNTLNK KKEEFIPLTP GEVKMYVCGP TVYNFFHIGN GRTFIVFDTI RRYFEYRGFK VDFVQNFTDI DDKMIKKANE EGITVKKIGD TYIKEYYQDA DALNIERATV NPRATEFIGE IIKFVKGLVD KGYAYEVDGD VYFSTKKFEG YGKLSGQNIE DLQSGARISV DERKKDPMDF AIWKAQKPGE PAWNSPWGMG RPGWHIECSC MAKKLLGETI DIHAGGSDLK FPHHENEIAQ SEALTGEPFA RYWLHSAFVN VNNEKMSKSL NNFFTAREIL ERYDADVIRF LMLSAHYRQQ LNFSEDLLES AKASVERIYN AIGNLENLID EVSREEMNEE EKAYLESLNK YKEKYIEKMD DDFNTADAIT AIFDLIKDTN TNITIDSSKE LAQKALELIR ELGAPLGMFQ KSTKGNLEEE IEALIAKRQQ ARKDRDFALA DKIRDELKDR GIVLEDTPQG VRWKRI
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