| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2421 |
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| Symbol | thyX |
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| ID | 4206189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2639089 |
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| End bp | 2639826 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642566969 |
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| Product | FAD-dependent thymidylate synthase |
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| Protein accession | YP_699683 |
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| Protein GI | 110803744 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1351] Predicted alternative thymidylate synthase |
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| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0588955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAAAAG TTAAATTATT ACAATATACA CCAGAACCAG AAAAGACCAT AGCAGCAGCG
GCTAAATTAT GCTATAGTCC TGTAGGTGTT GATGATATAT TAGAAAATTT AACTGATGAA
GGCGCGGAAA AGTTTTTAAA TATGCTTATG TCATATGGTC ATATGTCACC AATAGAGCAT
GTTTCATTTA CTTTTGCAGT AGAAGGAGTT TCAAGAAGCT TAACTCATCA GTTAGTTAGA
CATAGAATAG CATCTTACTC ACAGCAATCT CAAAGATATG TTAAGTTAGA TCAATTTGAA
TACATAGTAC CACCGGCTAT AGAGAATGAT GAAGTTGCTA AAAAGCTATT TATTGATCAA
ATGCAAGATG CACAAAAGGC ATATGATGAA ATAGTTGAAA GATTAAAAGA TAAATATATT
AGTGAAGGAA TTGGTGAAAA ACCAGCTGAG AAAAAAGCTA TAGAGGATGC AAGATATGTT
TTCCCTAATG CTTGTGAAAC AAAAATTGTA TTTACTATGA ATGCTAGAAG TTTAATGAAC
TTCTTCCATC ATAGATGTTG TGATAGAGCT CAATGGGAAA TAAGAACTAT GGCAGAAAAA
ATGGTTTATG AAGTTAAAAA GGTTGCCCCA ATATTATTTA AGAATGCAGG TCCAAGTTGT
GTAGCAGGTC CATGTCCTGA AGGAAAAATG TGTTGTGGAA AGCTTAAAGA TATGAGAACA
TTATATCTTG GAAAATAG
|
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| Protein sequence | MLKVKLLQYT PEPEKTIAAA AKLCYSPVGV DDILENLTDE GAEKFLNMLM SYGHMSPIEH
VSFTFAVEGV SRSLTHQLVR HRIASYSQQS QRYVKLDQFE YIVPPAIEND EVAKKLFIDQ
MQDAQKAYDE IVERLKDKYI SEGIGEKPAE KKAIEDARYV FPNACETKIV FTMNARSLMN
FFHHRCCDRA QWEIRTMAEK MVYEVKKVAP ILFKNAGPSC VAGPCPEGKM CCGKLKDMRT
LYLGK
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