| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2411 |
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| Symbol | rplA |
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| ID | 4204936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2633109 |
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| End bp | 2633798 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642566959 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_699674 |
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| Protein GI | 110801966 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000512351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAAAGA AATATATTGA AAGTTCAAAA TTAATAGATA AAAATGCATT ATATACTCCA
GCAGAAGCTT TAGAGCTTGC TGTTAAAACT GCAAAAGCTA AATTCGATGA AACTATCGAA
TTACACGTAA GATTAGGTGT AGACCCAAGA CATGCTGACC AACAAGTTAG AGGAGCTGTT
GTTCTTCCGC ACGGAACTGG TAAAGATGTT AAAGTTTTAG TTTTCGCTAA AGGTGAGAAA
GCTAAAGAAG CTGAAGCTGC AGGAGCAGAT TTCGTTGGAG CTGACGAATT AGTACAAAAA
ATTCAAGGTG AAAACTGGTT TGATTATGAT GTAGTTGTTG CTACTCCAGA TATGATGGGT
GTAGTTGGTA GATTAGGTAG AGTATTAGGA CCAAAAGGTT TAATGCCAAA CCCAAAATCA
GGAACAGTTA CATTTGACGT AGCTAACGCT ATAAAAGAAA TCAAAGCAGG TAAAGTTGAA
TATAGAGTAG ATAAGACTGC TATAGTTCAC TGCCCAATAG GAAAGAAATC TTTCGGAACT
GAGAAGTTGG TTGAAAACTT CAAAGCTTTA ATGGACGCTT TAGTAAAAGC TAAACCAGCT
GCTGCTAAAG GACAATACTT AAAATCAGTT TCAGTTTCAG CTACTATGGG ACCTGGAGCT
AAAGTTAACC CAGCTAAAGT TTTAGATTAA
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| Protein sequence | MGKKYIESSK LIDKNALYTP AEALELAVKT AKAKFDETIE LHVRLGVDPR HADQQVRGAV
VLPHGTGKDV KVLVFAKGEK AKEAEAAGAD FVGADELVQK IQGENWFDYD VVVATPDMMG
VVGRLGRVLG PKGLMPNPKS GTVTFDVANA IKEIKAGKVE YRVDKTAIVH CPIGKKSFGT
EKLVENFKAL MDALVKAKPA AAKGQYLKSV SVSATMGPGA KVNPAKVLD
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