Gene CPR_2404 details

Gene Information

• Locus tag: CPR_2404
• Symbol: rpsG
• ID: 4206213
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 2622927
• End bp: 2623397
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 642566952
• Product: 30S ribosomal protein S7
• Protein accession: YP_699667
• Protein GI: 110803690
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0049] Ribosomal protein S7
• TIGRFAM ID: [TIGR01029] ribosomal protein S7, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000208558
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCAAGAA AAGGACATAT TGCAAAAAGA GATGTATTAC CAGATCCAGT GTACAATTCA 
AAAGTTGTTA CTAAGTTAAT AAATAACGTA ATGGAAGATG GTAAAAAAGG AGTAGCACAA 
AAAATATGCT ACGATGCTTT CCAAATAATC AATGAGAAAA CTGGCAGAGA TGCTATGGAA 
GTTTTTGAGG AAGCAATGAA CAACATAATG CCTTTATTAG AGGTTAAAGC TAGAAGAATA 
GGTGGTGCTA ACTACCAAGT TCCAATAGAA GTAAGACCTG AAAGAAGACA GACTTTAGGA 
TTAAGATGGC TTCTTGCAGC TTCAAGAAAA AGAGGCGAGA AGTACATGAG AGAAAGATTA 
GCTGGAGAAT TAATGGATGC AGCTAACAAT ACTGGAGCAG CTGTTAAGAA GAGAGAAGAT 
ACTCACAAAA TGGCTGAAGC TAATAAAGCA TTTGCTCATT ACAGATATTA A 

 

Protein sequence

MPRKGHIAKR DVLPDPVYNS KVVTKLINNV MEDGKKGVAQ KICYDAFQII NEKTGRDAME 
VFEEAMNNIM PLLEVKARRI GGANYQVPIE VRPERRQTLG LRWLLAASRK RGEKYMRERL 
AGELMDAANN TGAAVKKRED THKMAEANKA FAHYRY