| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2400 |
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| Symbol | rpsJ |
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| ID | 4204545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2617347 |
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| End bp | 2617655 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642566949 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_699664 |
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| Protein GI | 110803264 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000028025 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAAAC AAAAAATAAG AATAAGATTA AAAGCATTTG ATCATACAAT ATTAGATCAA
TCAGCTGAGA AAATTGTTGA AACTGCTAAG TCTACAGGAG CAAAGGTTGT TGGACCAGTT
CCACTACCAA CTGAAAAAGA CGTTATAACA ATCTTAAGAG CTGTACATAA GTACAAAGAC
TCAAGAGAGC AGTTTGAAGT AAGAACTCAT AAGAGATTAA TAGACATCGT TAATCCATCA
CCAAAAACTG TTGATGCATT AATGAGATTA AACTTACCAG CAGGTGTTGA TATCGAAATA
AAACTTTAA
|
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| Protein sequence | MSKQKIRIRL KAFDHTILDQ SAEKIVETAK STGAKVVGPV PLPTEKDVIT ILRAVHKYKD
SREQFEVRTH KRLIDIVNPS PKTVDALMRL NLPAGVDIEI KL
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